RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 TAS2R46P59540 309 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 MEP1AQ16819 746 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 TBC1D28Q2M2D7 210 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 NADSYN1Q6IA69 706 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 C22orf42Q6IC83 251 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SBSNQ6UWP8 590 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 C5orf46Q6UWT4 87 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 TIFABQ6ZNK6 161 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 IQCKQ8N0W5 287 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 BTF3L4Q96K17 158 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SGK494L7N484 410 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 CSF1P09603 554 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ARSBP15848 533 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 CNPY1Q3B7I2 92 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 B3GLCTQ6Y288 498 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ASB17Q8WXJ9 295 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF566Q969W8 418 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 KCNA7Q96RP8 456 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 DHRS9Q9BPW9 319 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 EBF4Q9BQW3 602 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PINK1Q9BXM7 581 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SPHK1Q9NYA1 384 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 KCTD3Q9Y597 815 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PHLPP1O60346 1717 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PIRO00625 290 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 GPR39O43194 453 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ITM2AO43736 263 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 RPS18P62269 152 aaKnown RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SCAPQ12770 1279 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 LTB4RQ15722 352 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SLC22A6Q4U2R8 563 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 KHDC1Q4VXA5 237 aaKnown RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 DMAC2Q9NW81 257 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 VSX1Q9NZR4 365 aaPredicted RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 CPNE7Q9UBL6 633 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 GJD2Q9UKL4 321 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 A0A1B0GTW7 788 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 APOA2P02652 100 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 UGT2B7P16662 529 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 MAP2K4P45985 399 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 CST9LP1Q5W188 147 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 WBP2NLQ6ICG8 309 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SHISA6Q6ZSJ9 500 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF321PQ8N8H1 164 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ANKRD9Q96BM1 317 aaPredicted RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 KCNJ16Q9NPI9 418 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PADI1Q9ULC6 663 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF337Q9Y3M9 751 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SLIT3O75094 1523 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 A0A1W2PS29 197 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SLC9B1P1A6NJY1 282 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 C1orf196B1AJZ1 125 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 NCS1P62166 190 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PPP1R8Q12972 351 aaKnown RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 NANOGP8Q6NSW7 305 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 GPR155Q7Z3F1 870 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 KCTD20Q7Z5Y7 419 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF583Q96ND8 569 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 MBOAT4Q96T53 435 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SULT1C2O00338 296 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SLC35A1P78382 337 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 PCGF3Q3KNV8 242 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF585AQ6P3V2 769 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 CISD2Q8N5K1 135 aaKnown RBP10.53□□□□□ -0.72
SCN4A-201ENST00000435607 C4orf32Q8N8J7 132 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 BTBD2Q9BX70 525 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ANKRD19PQ9H560 264 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 UBQLN4Q9NRR5 601 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 OR6C2Q9NZP2 312 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 LTBP3Q9NS15 1303 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM233B4DJY2 109 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 LGALS8O00214 317 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 UGDHO60701 494 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 DDAH2O95865 285 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 FUT1P19526 365 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 YPEL5P62699 121 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SIRPAP78324 504 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 GALEQ14376 348 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 LTC4SQ16873 150 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ADIPOR2Q86V24 386 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 UMODL1-AS1Q8N2C9 162 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 MITD1Q8WV92 249 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 HAS2Q92819 552 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 ITFG2Q969R8 447 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 TRIB1Q96RU8 372 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 METTL9Q9H1A3 318 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 PSAT1Q9Y617 370 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 MYO5BQ9ULV0 1848 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 C2orf78A6NCI8 922 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SPINT2O43291 252 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 HBG1P69891 147 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 HBG2P69892 147 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 CMTM3Q96MX0 182 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 CNTNAP3BQ96NU0 1288 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 PIGQQ9BRB3 760 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 NMNAT2Q9BZQ4 307 aa10.53□□□□□ -0.72
SCN4A-201ENST00000435607 SRPX2O60687 465 aaPredicted RBP10.53□□□□□ -0.72
SCN4A-201ENST00000435607 DPM1O60762 260 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms