RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 PDSS1Q5T2R2 415 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 HES5Q5TA89 166 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RAB12Q6IQ22 244 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 Q6ZTK2 550 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 OAFQ86UD1 273 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM17Q86X19 198 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 PLA2G15Q8NCC3 412 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 BBS1Q8NFJ9 593 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 OR2A12Q8NGT7 310 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 TRIM43Q96BQ3 446 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 GAL3ST1Q99999 423 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 TREX2Q9BQ50 279 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 NDC1Q9BTX1 674 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 RSPH9Q9H1X1 276 aaPredicted RBP6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 KLHL31Q9H511 634 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 CXorf36Q9H7Y0 433 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 ZSCAN32Q9NX65 697 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 SLCO1C1Q9NYB5 712 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 KCNMB2Q9Y691 235 aa6.93□□□□□ -1.3
SYNPO2-203ENST00000434046 KCNE1BA0A087WTH5 132 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 CACNB4O00305 520 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 GOSR2O14653 212 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 GNB5O14775 395 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 CASC3O15234 703 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 UBXN7O94888 489 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SERPINA3P01011 423 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 STATHP02808 62 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ACP5P13686 325 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 HOXB9P17482 250 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 GCGRP47871 477 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 HMGA2P52926 109 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 RAP2BP61225 183 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TNFRSF17Q02223 184 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM201Q5SNT2 666 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 PRAMEF13Q5VWM6 474 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TMUB2Q71RG4 321 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 MTSS1LQ765P7 747 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 PAQR7Q86WK9 346 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 OR5J2Q8NH18 312 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 OR5W2Q8NH69 310 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TFGQ92734 400 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SMARCD2Q92925 531 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 NEIL2Q969S2 332 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF354BQ96LW1 612 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 KCNJ15Q99712 375 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 EFCAB11Q9BUY7 163 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SPATA5L1Q9BVQ7 753 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 CFHR5Q9BXR6 569 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 QRSL1Q9H0R6 528 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM38AQ9H6F2 299 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TREM1Q9NP99 234 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 BIN3Q9NQY0 253 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 P2RX2Q9UBL9 471 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 GPR160Q9UJ42 338 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 LRRC37A2A6NM11 1700 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF236Q9UL36 1845 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 OR14I1A6ND48 311 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 GLOD5A6NK44 160 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 A8MVJ9 347 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SEC14L5O43304 696 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 MT-ND5P03915 603 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 NMBP08949 121 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SULT1A3P0DMM9 295 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SULT1A4P0DMN0 295 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 PNLIPRP1P54315 467 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 LASP1Q14847 261 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 NHLRC1Q6VVB1 395 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 RPTNQ6XPR3 784 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ERN2Q76MJ5 926 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 DGLUCYQ7Z3D6 616 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 LINC00469Q8N7U9 141 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 OR13C5Q8NGS8 318 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SPPL3Q8TCT6 385 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 EVA1AQ9H8M9 152 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC6A20Q9NP91 592 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 BABAM2Q9NXR7 383 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 COMMD9Q9P000 198 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ERVK-19Q9WJR5 959 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 NYNRINQ9P2P1 1898 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 AGAP14A8MT82 685 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 F8W036 122 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 KIAA0355O15063 1070 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC16A5O15375 505 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SSX5O60225 188 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 FZD6O60353 706 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC2A10O95528 541 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 EGFP01133 1207 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 C1SP09871 688 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF35P13682 527 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 PPP3CBP16298 524 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 NPR2P20594 1047 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 IGFBP4P22692 258 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 IRS1P35568 1242 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SSR2P43308 183 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 MTNR1BP49286 362 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 RNF144AP50876 292 aaPredicted RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 ANXA11P50995 505 aaKnown RBP6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 SORDQ00796 357 aa6.92□□□□□ -1.3
SYNPO2-203ENST00000434046 TGM3Q08188 693 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms