RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 PRRT3Q5FWE3 981 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 COX18Q8N8Q8 333 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 TMEM52Q8NDY8 209 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FGF14Q92915 247 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SLC22A18Q96BI1 424 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 BPIFA2Q96DR5 249 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SMIM10Q96HG1 83 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 GFM1Q96RP9 751 aaKnown RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 TMEM168Q9H0V1 697 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 CAPN10Q9HC96 672 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 ADAM30Q9UKF2 790 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 C19orf53Q9UNZ5 99 aaPredicted RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 ANKRD34BA5PLL1 514 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SCO2O43819 266 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FGF17O60258 216 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SLC19A2O60779 497 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 LYPD3O95274 346 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 IL9P15248 144 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 UGT2B7P16662 529 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 NT5EP21589 574 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 NDUFS1P28331 727 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 NOS3P29474 1203 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 RFX3P48380 749 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 MTNR1BP49286 362 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 E2F1Q01094 437 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FOXK2Q01167 660 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 BDH1Q02338 343 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SLC3A1Q07837 685 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 RIN1Q13671 783 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 GALEQ14376 348 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 EXOSC7Q15024 291 aaKnown RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 TMEM196Q5HYL7 178 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SNAP47Q5SQN1 464 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FHL5Q5TD97 284 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FCRL6Q6DN72 434 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 PARM1Q6UWI2 310 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 TRILQ7L0X0 811 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 LNX2Q8N448 690 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 CYB561A3Q8NBI2 242 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 OR5T3Q8NGG3 340 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 OR51A7Q8NH64 312 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 GRHL3Q8TE85 626 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 TEAD3Q99594 435 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 HDHD2Q9H0R4 259 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FN3KQ9H479 309 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 TRIM36Q9NQ86 728 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 FBXL4Q9UKA2 621 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 DOCK8Q8NF50 2099 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 TRIOO75962 3097 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 OR6C74A6NCV1 312 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 FAM86C2PA6NEL3 165 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 PRR23D1E9PI22 279 aaPredicted RBP10.94□□□□□ -0.66
CD44-209ENST00000433892 LANCL1O43813 399 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 PRR23D2P0DMB1 279 aaPredicted RBP10.94□□□□□ -0.66
CD44-209ENST00000433892 RPS4Y1P22090 263 aaKnown RBP10.94□□□□□ -0.66
CD44-209ENST00000433892 GALP22466 123 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 PTBP1P26599 531 aaKnown RBP eCLIP10.94□□□□□ -0.663e-6■■■■■ 30.2
CD44-209ENST00000433892 CLDN20P56880 219 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 OR10A3P58181 314 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 SF3A2Q15428 464 aaKnown RBP10.94□□□□□ -0.66
CD44-209ENST00000433892 FIGLAQ6QHK4 219 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 RPTNQ6XPR3 784 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 RNF113BQ8IZP6 322 aaKnown RBP10.94□□□□□ -0.66
CD44-209ENST00000433892 ACOT12Q8WYK0 555 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 NECTIN4Q96NY8 510 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 MYADMQ96S97 322 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 NDEL1Q9GZM8 345 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 CD93Q9NPY3 652 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 CMC2Q9NRP2 79 aa10.94□□□□□ -0.66
CD44-209ENST00000433892 USP36Q9P275 1121 aaKnown RBP10.94□□□□□ -0.66
CD44-209ENST00000433892 GXYLT2A0PJZ3 443 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 URADA6NGE7 173 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 SGK494L7N484 410 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 HYAL3O43820 417 aaPredicted RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 RFPL3O75679 317 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 RCBTB2O95199 551 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 RASGRP1O95267 797 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 GYPBP06028 91 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 PVRP15151 417 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 COL9A1P20849 921 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 BMP8BP34820 402 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 GABRA3P34903 492 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 EFR3AQ14156 821 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 KIR2DS3Q14952 304 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 YIF1BQ5BJH7 314 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 HBMQ6B0K9 141 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 SYCE2Q6PIF2 218 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ASB18Q6ZVZ8 466 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ABHD13Q7L211 337 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 VASH1Q7L8A9 365 aaPredicted RBP10.93□□□□□ -0.66
CD44-209ENST00000433892 BMP8AQ7Z5Y6 402 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 ZAR1Q86SH2 424 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 CDK20Q8IZL9 346 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 TCTE3Q8IZS6 198 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 SAMD12Q8N8I0 201 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 C17orf47Q8NEP4 570 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 OR4M1Q8NGD0 313 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MARVELD1Q9BSK0 173 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 NDC1Q9BTX1 674 aa10.93□□□□□ -0.66
CD44-209ENST00000433892 MEPEQ9NQ76 525 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms