RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CACNG6Q9BXT2 260 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 UBQLN3Q9H347 655 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 ZCCHC4Q9H5U6 513 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 ERVMER34-1Q9H9K5 563 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 NTMQ9P121 344 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 C5AR2Q9P296 337 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 RASD1Q9Y272 281 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 SLC27A6Q9Y2P4 619 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 SESN1Q9Y6P5 492 aa13.74□□□□□ -0.21
DDX56-205ENST00000433257 TRAPPC13A5PLN9 417 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 PRR23D1E9PI22 279 aaPredicted RBP13.73□□□□□ -0.21
DDX56-205ENST00000433257 REM1O75628 298 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 OR7A10O76100 309 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 TGM6O95932 706 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 PRR23D2P0DMB1 279 aaPredicted RBP13.73□□□□□ -0.21
DDX56-205ENST00000433257 TEAD1P28347 426 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 BTCP35070 178 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
DDX56-205ENST00000433257 ADGRG3Q86Y34 549 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 OR2L5Q8NG80 312 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 ABHD4Q8TB40 342 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 FANK1Q8TC84 345 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 HS6ST2Q96MM7 605 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 GPSM3Q9Y4H4 160 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 DENND4AQ7Z401 1863 aa13.73□□□□□ -0.21
DDX56-205ENST00000433257 A0A1W2PPV9 198 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 PDCD5O14737 125 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SULT1B1O43704 296 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 HYAL3O43820 417 aaPredicted RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 ERAL1O75616 437 aaKnown RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 SC5DO75845 299 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 PAHP00439 452 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 IFI6P09912 130 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ADRB3P13945 408 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ACTA2P62736 377 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ACTG2P63267 376 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SLC36A2Q495M3 483 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 CDONQ4KMG0 1287 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ELFN2Q5R3F8 820 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 PIP5KL1Q5T9C9 394 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 METTL11BQ5VVY1 283 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 FAM180BQ6P0A1 224 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 MTSS1LQ765P7 747 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 OVCH1Q7RTY7 1134 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 NRROSQ86YC3 692 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SIRT6Q8N6T7 355 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 UXS1Q8NBZ7 420 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 FAM71CQ8NEG0 241 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 OR11H7Q8NGC8 314 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 OR2L8Q8NGY9 312 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 NXPE3Q969Y0 559 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ELP4Q96EB1 424 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 MS4A4EQ96PG1 132 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 C17orf62Q9BQA9 187 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 PLEKHA1Q9HB21 404 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 MED9Q9NWA0 146 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ZNF443Q9Y2A4 671 aaPredicted RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 PLXND1Q9Y4D7 1925 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 RIIAD1A6NNX1 92 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 CH25HO95992 272 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 IFNGP01579 166 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 IFNA16P05015 189 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 F3P13726 295 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 PRKACBP22694 351 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 LCN1P31025 176 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 RAB28P51157 221 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 DUSP8Q13202 625 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 LRRC32Q14392 662 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ELAVL3Q14576 367 aaKnown RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 GSG1Q2KHT4 349 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ARHGAP11BQ3KRB8 267 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 ABHD17CQ6PCB6 329 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 LYPD4Q6UWN0 246 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 RTL4Q6ZR62 310 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 CEACAM19Q7Z692 300 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 LSMEM1Q8N8F7 131 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 FAM98AQ8NCA5 519 aaKnown RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 SMARCD2Q92925 531 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SAMD8Q96LT4 415 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 MENTQ9BUN1 341 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SPRTNQ9H040 489 aaPredicted RBP13.72□□□□□ -0.21
DDX56-205ENST00000433257 OR52D1Q9H346 318 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 GLS2Q9UI32 602 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 PLAGL1Q9UM63 463 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SPATA2Q9UM82 520 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 CCL26Q9Y258 94 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 SLC35A3Q9Y2D2 325 aa13.72□□□□□ -0.21
DDX56-205ENST00000433257 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.21
DDX56-205ENST00000433257 FEZF1A0PJY2 475 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SLC9B1P1A6NJY1 282 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 C1QTNF3-AMACRE9PGA6 284 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 SMLR1H3BR10 107 aa13.71□□□□□ -0.21
DDX56-205ENST00000433257 I3L521 148 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms