RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 GALNT10Q86SR1 603 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 MARCH3Q86UD3 253 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 DTX2Q86UW9 622 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 TDRPQ86YL5 185 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 MRPL41Q8IXM3 137 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 ZNF100Q8IYN0 542 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 MUC15Q8N387 334 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 METTL4Q8N3J2 472 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 C3orf56Q8N813 242 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 L3MBTL4Q8NA19 623 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 TOR1AIP2Q8NFQ8 470 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 RHEBL1Q8TAI7 183 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 WDR20Q8TBZ3 569 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 PIWIL2Q8TC59 973 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 SLC9A6Q92581 669 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 PROX1Q92786 737 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 UBXN10Q96LJ8 280 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 KLHL15Q96M94 604 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 ATOH8Q96SQ7 321 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 OSBPL9Q96SU4 736 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 KCNS3Q9BQ31 491 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 PLA2G12AQ9BZM1 189 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 TRIM2Q9C040 744 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 IQCGQ9H095 443 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 FKRPQ9H9S5 495 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 SAYSD1Q9NPB0 183 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 KLHL13Q9P2N7 655 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 ZNF639Q9UID6 485 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 B3GALT5Q9Y2C3 310 aa6.97□□□□□ -1.29
ECHDC1-207ENST00000430841 TRBV23-1A0A0A0MS06 115 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CIB4A0PJX0 185 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CCT8L1PA6NM43 557 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 KRTAP9-7A8MTY7 169 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 PCDH7O60245 1069 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 PIAS1O75925 651 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 LYZL6O75951 148 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 SEC31AO94979 1220 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 SLITRK5O94991 958 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 UTS2O95399 124 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ANGPTL1O95841 491 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 OTCP00480 354 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 KRT6AP02538 564 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 OPN1LWP04000 364 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 KRT6BP04259 564 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 IL3P08700 152 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CT45A8P0DMV1 189 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CT45A9P0DMV2 189 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 IGHV4-31P0DP07 118 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 GGT1P19440 569 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 PTNP21246 168 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 IGFBP5P24593 272 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 KRT6CP48668 564 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 NCBP2P52298 156 aaKnown RBP eCLIP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ACSM2AQ08AH3 577 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 NAB1Q13506 487 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 FASTKD3Q14CZ7 662 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ZKSCAN8Q15776 578 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 PGGHGQ32M88 737 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CT45A2Q5DJT8 189 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ZNF628Q5EBL2 1059 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ACSM2BQ68CK6 577 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 SHQ1Q6PI26 577 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 KLHL24Q6TFL4 600 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 TFAP2EQ6VUC0 442 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 NPSR1Q6W5P4 371 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ISCA2Q86U28 154 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 GGNQ86UU5 652 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 UBE2J2Q8N2K1 259 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 SLC43A2Q8N370 569 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 C1orf52Q8N6N3 182 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 PTGR2Q8N8N7 351 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ZNF540Q8NDQ6 660 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 SGMS2Q8NHU3 365 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 HTRA1Q92743 480 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 OSTF1Q92882 214 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 NXNL1Q96CM4 212 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CNRIP1Q96F85 164 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 CHMP6Q96FZ7 201 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 RNF145Q96MT1 663 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 VSTM2LQ96N03 204 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 DHRS9Q9BPW9 319 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 BRF2Q9HAW0 419 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 EML4Q9HC35 981 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 MYNNQ9NPC7 610 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 KLHL9Q9P2J3 617 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 SNX12Q9UMY4 172 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 ATP23Q9Y6H3 246 aa6.96□□□□□ -1.3
ECHDC1-207ENST00000430841 TCRBV9S1A1TA0A576 114 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 TTC36A6NLP5 189 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 M0R1B8 84 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 NDUFS8O00217 210 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 SCDO00767 359 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 PRKD3O94806 890 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 SNUPNO95149 360 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 SIX3O95343 332 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 TGFAP01135 160 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 GSTA2P09210 222 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 PTAFRP25105 342 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 HMOX2P30519 316 aa6.95□□□□□ -1.3
ECHDC1-207ENST00000430841 SSTR1P30872 391 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms