RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 ZDHHC12Q96GR4 267 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 NECAB3Q96P71 396 aaPredicted RBP9.34□□□□□ -0.91
RPE-206ENST00000429921 STACQ99469 402 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 TM9SF2Q99805 663 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 IFT27Q9BW83 186 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 CDCA4Q9BXL8 241 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 RTN4RQ9BZR6 473 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 UBQLN3Q9H347 655 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 SMOC1Q9H4F8 434 aa9.34□□□□□ -0.91
RPE-206ENST00000429921 SIDT1Q9NXL6 827 aaKnown RBP9.34□□□□□ -0.91
RPE-206ENST00000429921 SPIN1Q9Y657 262 aaPredicted RBP9.34□□□□□ -0.91
RPE-206ENST00000429921 LILRA5A6NI73 299 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 DVL2O14641 736 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 MYL12BO14950 172 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 SURF4O15260 269 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 PPP1R3DO95685 299 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 LALBAP00709 142 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CLPSP04118 112 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 GSTM3P21266 225 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 RPS4Y1P22090 263 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 NOS3P29474 1203 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 IFNGR2P38484 337 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ACAA2P42765 397 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 GAS1P54826 345 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CDH11P55287 796 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 EFNB1P98172 346 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CRYZQ08257 329 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 EXOSC6Q5RKV6 272 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 GUSBP11Q6P575 273 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 OGFOD3Q6PK18 319 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CBLN3Q6UW01 205 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 APOOLQ6UXV4 268 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 OR6C4Q8NGE1 309 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 TM9SF4Q92544 642 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 PIGKQ92643 395 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ATOH1Q92858 354 aaPredicted RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 FGF11Q92914 225 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 NXF5Q9H1B4 397 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 FN3KQ9H479 309 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CCDC86Q9H6F5 360 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 LANCL2Q9NS86 450 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 DNAJB12Q9NXW2 375 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 CTSFQ9UBX1 484 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 OSGIN1Q9UJX0 560 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ZNF223Q9UK11 482 aaPredicted RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 CBLCQ9ULV8 474 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 MRPS33Q9Y291 106 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 LSM2Q9Y333 95 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 PLD2O14939 933 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 TIAF1O95411 115 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 THBS1P07996 1170 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 FPR3P25089 353 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 GTF2E2P29084 291 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 MTNR1AP48039 350 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 RPS7P62081 194 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 DNASE1L3Q13609 305 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CD226Q15762 336 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 OCLNQ16625 522 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 PGGHGQ32M88 737 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 EIPR1Q53HC9 387 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ALG10BQ5I7T1 473 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CD300LDQ6UXZ3 194 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 MED25Q71SY5 747 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ZNF367Q7RTV3 350 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 C17orf82Q86X59 251 aaPredicted RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 ZNF595Q8IYB9 648 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 NANOGP1Q8N7R0 232 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ZNF615Q8N8J6 731 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 SYT14Q8NB59 555 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 FCGR1BQ92637 280 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 BORCS5Q969J3 196 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 SLC38A2Q96QD8 506 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 DCLRE1CQ96SD1 692 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 ADOQ96SZ5 270 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 TAPBPLQ9BX59 468 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ISG20L2Q9H9L3 353 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 TMEM27Q9HBJ8 222 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 SNTG1Q9NSN8 517 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 CNOT2Q9NZN8 540 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 PCDHGA3Q9Y5H0 932 aa9.33□□□□□ -0.92
RPE-206ENST00000429921 ASCC3Q8N3C0 2202 aaKnown RBP9.33□□□□□ -0.92
RPE-206ENST00000429921 ALPK2Q86TB3 2170 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 ZDBF2Q9HCK1 2354 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 PCNX3Q9H6A9 2034 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 CCRL2O00421 344 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 CTDSP2O14595 271 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 KLF4O43474 513 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 COQ9O75208 318 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 SOX30O94993 753 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 RAB36O95755 333 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 CSTAP01040 98 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 NUDT1P36639 197 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 RPS19P39019 145 aaKnown RBP9.32□□□□□ -0.92
RPE-206ENST00000429921 STAT5AP42229 794 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 RPS25P62851 125 aaKnown RBP9.32□□□□□ -0.92
RPE-206ENST00000429921 HSD11B2P80365 405 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 GRM7Q14831 915 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 NCF4Q15080 339 aa9.32□□□□□ -0.92
RPE-206ENST00000429921 TMEM201Q5SNT2 666 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms