RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 FAM57BQ71RH2 274 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 MUCL1Q96DR8 90 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 FAM234AQ9H0X4 552 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 TEX10Q9NXF1 929 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SLC35A3Q9Y2D2 325 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 MEGF11A6BM72 1044 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 F5H5P2 479 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 GPR39O43194 453 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 PRICKLE3O43900 615 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 PROZP22891 400 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 HLCSP50747 726 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 WNT4P56705 351 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 DYRK1AQ13627 763 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 LCN8Q6JVE9 175 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 ANKRD54Q6NXT1 300 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 TSPYL5Q86VY4 417 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 TPRA1Q86W33 373 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SLC39A11Q8N1S5 342 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 OR14K1Q8NGZ2 314 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SMIM14Q96QK8 99 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 NFAT5O94916 1531 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 LOC105369274A0A096LPK9 316 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 RNASET2O00584 256 aaKnown RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 ARPC5O15511 151 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 MANEAQ5SRI9 462 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 NKAIN2Q5VXU1 208 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 RBM12BQ8IXT5 1001 aaKnown RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 OR4N4Q8N0Y3 316 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 OR5D14Q8NGL3 314 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 DDX31Q9H8H2 851 aaKnown RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 HCSTQ9UBK5 93 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF223Q9UK11 482 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF443Q9Y2A4 671 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 MAGED1Q9Y5V3 778 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SSX4O60224 188 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 IFNA17P01571 189 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 POU3F1Q03052 451 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 PRAMEF20Q5VT98 475 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 AGAP7PQ5VUJ5 663 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 AGAP6Q5VW22 663 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 COMMD7Q86VX2 200 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 HLA-CQ95604 372 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 BPIFA2Q96DR5 249 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SAT2Q96F10 170 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 LIN37Q96GY3 246 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 AGAP4Q96P64 663 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 KRBA1A5PL33 1030 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 BCAT2O15382 392 aaPredicted RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 DENRO43583 198 aaKnown RBP14.45□□□□□ -0.1
PTPRF-206ENST00000429895 CNMDO75829 334 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 CRHBPP24387 322 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 HTR2BP41595 481 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF529Q6P280 563 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 C4orf36Q96KX1 117 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 OR7D2Q96RA2 312 aa14.45□□□□□ -0.1
PTPRF-206ENST00000429895 A6NIN4 97 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF736B4DX44 427 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 G3V2L1 256 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 TRAPPC2LH3BP13 241 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 MRPL33O75394 65 aaKnown RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SCRG1O75711 98 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ZFAND5O76080 213 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 MMP2P08253 660 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 GAAP10253 952 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 PCGF2P35227 344 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 TCEAL1Q15170 157 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SF3A2Q15428 464 aaKnown RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 PKDCCQ504Y2 493 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SLC22A10Q63ZE4 541 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 CD163Q86VB7 1156 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 OR14A2Q96R54 314 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 GPN2Q9H9Y4 310 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 PRDM9Q9NQV7 894 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 BTNL2Q9UIR0 455 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SLX4IPQ5VYV7 408 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ULBP2Q9BZM5 246 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ACKR4Q9NPB9 350 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 PCDHGA7Q9Y5G6 932 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 HSPE1-MOB4S4R3N1 261 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 GABRR3A8MPY1 467 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 B4DXG7 233 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 IDH3GP51553 393 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 EFNA3P52797 238 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ARHGAP19Q14CB8 494 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 BATFQ16520 125 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 FAM198BQ6UWH4 519 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 PRSS48Q7RTY5 328 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 TAAR8Q969N4 342 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SLAMF9Q96A28 289 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 TWSG1Q9GZX9 223 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 FOLH1BQ9HBA9 442 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 NDUFAF4Q9P032 175 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 BOKQ9UMX3 212 aaPredicted RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ANKRD26Q9UPS8 1709 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ZCWPW2A0A1B0GU75 182 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 OR2T1O43869 369 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 SDC1P18827 310 aa14.44□□□□□ -0.1
PTPRF-206ENST00000429895 PRDX3P30048 256 aaKnown RBP14.44□□□□□ -0.1
PTPRF-206ENST00000429895 ZNF252P-AS1Q0IIN9 211 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms