RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 VCANP13611 3396 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 TCF20Q9UGU0 1960 aaKnown RBP13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ARRDC5A6NEK1 342 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 LRRC72A6NJI9 287 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 E9PI62 339 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 CERS1P27544 350 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ADPRHP54922 357 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ZNF761Q86XN6 746 aaPredicted RBP13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ACBD7Q8N6N7 88 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ABHD1Q96SE0 405 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 GTPBP2Q9BX10 602 aaKnown RBP13.9□□□□□ -0.18
CACTIN-203ENST00000429344 TMEM5Q9Y2B1 443 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ATG4BQ9Y4P1 393 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 WDR87Q6ZQQ6 2873 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 SLC9B1P1A6NJY1 282 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 CHP2O43745 196 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 SLC22A5O76082 557 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 PDGFAP04085 211 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 CLUP10909 449 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 PITPNBP48739 271 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 DGCR2P98153 550 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ILF3Q12906 894 aaKnown RBP eCLIP13.9□□□□□ -0.18
CACTIN-203ENST00000429344 FGL2Q14314 439 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 C1orf94Q6P1W5 598 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 LINGO2Q7L985 606 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 ORAI3Q9BRQ5 295 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 MARVELD1Q9BSK0 173 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 FLVCR2Q9UPI3 526 aa13.9□□□□□ -0.18
CACTIN-203ENST00000429344 HELZP42694 1942 aaKnown RBP13.9□□□□□ -0.18
CACTIN-203ENST00000429344 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 ENPP1P22413 925 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 IGFALSP35858 605 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 E2F1Q01094 437 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 NR2C2APQ86WQ0 139 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 C9orf62Q8N4C0 152 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 IL17RCQ8NAC3 791 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 MORN4Q8NDC4 146 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 OR2T33Q8NG76 320 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 OR11H7Q8NGC8 314 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 OR11H4Q8NGC9 324 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 OR52L1Q8NGH7 329 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 GDF15Q99988 308 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 C6orf106Q9H6K1 298 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 ADAP2Q9NPF8 381 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 AK6Q9Y3D8 172 aaKnown RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 ARID1AO14497 2285 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 IRGMA1A4Y4 181 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 ZNF860A6NHJ4 632 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 RNF13O43567 381 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 RGS9O75916 674 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 DUSP2Q05923 314 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 C1orf61Q13536 156 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 HYAL4Q2M3T9 481 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 OR4C11Q6IEV9 310 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 ZNF322Q6U7Q0 402 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 SIAH3Q8IW03 269 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 NUP43Q8NFH3 380 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 CCL4L1Q8NHW4 92 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 SUN3Q8TAQ9 357 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 LINC00615Q96LM1 132 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 CD93Q9NPY3 652 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 NANSQ9NR45 359 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 NAA10P41227 235 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 TMEM91Q6ZNR0 172 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 FTMTQ8N4E7 242 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 DNAJA4Q8WW22 397 aaPredicted RBP13.89□□□□□ -0.19
CACTIN-203ENST00000429344 RIT1Q92963 219 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 CCDC3Q9BQI4 270 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 OR10A4Q9H209 315 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 FOLH1BQ9HBA9 442 aa13.89□□□□□ -0.19
CACTIN-203ENST00000429344 SMAD9O15198 467 aaKnown RBP13.88□□□□□ -0.19
CACTIN-203ENST00000429344 EPPINO95925 133 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 PROS1P07225 676 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 BTN3A2P78410 334 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 OC90Q02509 493 aaPredicted RBP13.88□□□□□ -0.19
CACTIN-203ENST00000429344 PRDX1Q06830 199 aaKnown RBP13.88□□□□□ -0.19
CACTIN-203ENST00000429344 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 SNTA1Q13424 505 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 ZBTB37Q5TC79 503 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 ARMC6Q6NXE6 501 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 KANSL1Q7Z3B3 1105 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 TAF8Q7Z7C8 310 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 FBXL4Q9UKA2 621 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 CYP8B1Q9UNU6 501 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 CHURC1-FNTBB4DL54 471 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 CDC42EP2O14613 210 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 SLC19A2O60779 497 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 TP53I3Q53FA7 332 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 PRRT3Q5FWE3 981 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 PRPF38BQ5VTL8 546 aaKnown RBP13.88□□□□□ -0.19
CACTIN-203ENST00000429344 DUSP18Q8NEJ0 188 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 OR5W2Q8NH69 310 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 GIMAP1Q8WWP7 306 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 OSTF1Q92882 214 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 KIAA1143Q96AT1 154 aaPredicted RBP13.88□□□□□ -0.19
CACTIN-203ENST00000429344 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 HCAR1Q9BXC0 346 aa13.88□□□□□ -0.19
CACTIN-203ENST00000429344 TMEM168Q9H0V1 697 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms