RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 CCNJQ5T5M9 372 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 NUFIP2Q7Z417 695 aaKnown RBP11.65□□□□□ -0.54
HLA-F-219ENST00000429294 ZAR1Q86SH2 424 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 TDRPQ86YL5 185 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 HIPK1Q86Z02 1210 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
HLA-F-219ENST00000429294 ATP6V1C2Q8NEY4 427 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 LILRB1Q8NHL6 650 aaPredicted RBP11.65□□□□□ -0.54
HLA-F-219ENST00000429294 FBXO27Q8NI29 283 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 ZFP90Q8TF47 636 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 MTERF3Q96E29 417 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 GIMAP5Q96F15 307 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 C16orf58Q96GQ5 468 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 ADAD1Q96M93 576 aaKnown RBP11.65□□□□□ -0.54
HLA-F-219ENST00000429294 STACQ99469 402 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 RHNO1Q9BSD3 238 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 DUSP22Q9NRW4 184 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 ZCCHC3Q9NUD5 404 aaKnown RBP11.65□□□□□ -0.54
HLA-F-219ENST00000429294 CISD1Q9NZ45 108 aaKnown RBP11.65□□□□□ -0.54
HLA-F-219ENST00000429294 TBK1Q9UHD2 729 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 TMED5Q9Y3A6 229 aa11.65□□□□□ -0.54
HLA-F-219ENST00000429294 A8MV72 311 aaPredicted RBP11.64□□□□□ -0.55
HLA-F-219ENST00000429294 NPIPB8E9PQR5 432 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 G3V2L1 256 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 RIPK2O43353 540 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 ADAM11O75078 769 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 IGHV4-39P01824 125 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 KRT16P08779 473 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 P2RX1P51575 399 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 DNAJB13P59910 316 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 RAC3P60763 192 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 ZNF117Q03924 483 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 LASP1Q14847 261 aaKnown RBP11.64□□□□□ -0.55
HLA-F-219ENST00000429294 PPA1Q15181 289 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 CD226Q15762 336 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 AGAP6Q5VW22 663 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 CLEC6AQ6EIG7 209 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 LRIG3Q6UXM1 1119 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 Q6ZT83 130 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 KBTBD8Q8NFY9 601 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 NEUROG1Q92886 237 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 RADILQ96JH8 1075 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 MRGPRX4Q96LA9 322 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 SRXN1Q9BYN0 137 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 TRIM2Q9C040 744 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 PIGUQ9H490 435 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 GIN1Q9NXP7 522 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 FAF1Q9UNN5 650 aaPredicted RBP11.64□□□□□ -0.55
HLA-F-219ENST00000429294 CCL27Q9Y4X3 112 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 ACTL7BQ9Y614 415 aa11.64□□□□□ -0.55
HLA-F-219ENST00000429294 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.64□□□□□ -0.55
HLA-F-219ENST00000429294 DPRXA6NFQ7 191 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 TMEM114B3SHH9 223 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 AZIN1O14977 448 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 NTN1O95631 604 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 HMGN2P05204 90 aaKnown RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 CPA3P15088 417 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 SDC1P18827 310 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 SHC1P29353 583 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 HPCAL1P37235 193 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 RPL3P39023 403 aaKnown RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 FRKP42685 505 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 OR3A2P47893 321 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 NUDT6P53370 316 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 CDH11P55287 796 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 RPL38P63173 70 aaKnown RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 RASGEF1BQ0VAM2 473 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 SELENBP1Q13228 472 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 PDE7AQ13946 482 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 MLC1Q15049 377 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 PGGHGQ32M88 737 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 ZNF385BQ569K4 471 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 P2RY8Q86VZ1 359 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 IFT20Q8IY31 132 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 ZNF100Q8IYN0 542 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 TMCO5AQ8N6Q1 288 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 ZNF614Q8N883 585 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 OR2W6PQ8NHA6 318 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 CLHC1Q8NHS4 586 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 ADAMTS15Q8TE58 950 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 CDS1Q92903 461 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 FAM120BQ96EK7 910 aaKnown RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 OTUB1Q96FW1 271 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 C16orf45Q96MC5 204 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 TRAF4Q9BUZ4 470 aaPredicted RBP11.63□□□□□ -0.55
HLA-F-219ENST00000429294 BCO1Q9HAY6 547 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 OXSMQ9NWU1 459 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 BAIAP2L1Q9UHR4 511 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 MID2Q9UJV3 735 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 CARD8Q9Y2G2 431 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 FIS1Q9Y3D6 152 aa11.63□□□□□ -0.55
HLA-F-219ENST00000429294 CR1P17927 2039 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 SSX4O60224 188 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 LYZL6O75951 148 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 PROCP04070 461 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 GGT1P19440 569 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 ENPP1P22413 925 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 MAPK1P28482 360 aa11.62□□□□□ -0.55
HLA-F-219ENST00000429294 CCR4P51679 360 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms