RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 C11orf54Q9H0W9 315 aaPredicted RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 RNF121Q9H920 327 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 TBC1D17Q9HA65 648 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 RBFOX1Q9NWB1 397 aaKnown RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 CENPVL1A0A0U1RR11 272 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 B4DXG7 233 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 PRAMEF26H0Y7S4 382 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 NARSO43776 548 aaKnown RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 NTN1O95631 604 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 IFNGP01579 166 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 PRKAR1AP10644 381 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 PRG2P13727 222 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 ZNF3P17036 446 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 NUDT1P36639 197 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 TPMTP51580 245 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 SNRPNP63162 240 aaKnown RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 ZNHIT3Q15649 155 aaPredicted RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 RAB30Q15771 203 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 ATAD3CQ5T2N8 411 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 HACD4Q5VWC8 232 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 HBMQ6B0K9 141 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 ARHGAP11AQ6P4F7 1023 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 DGLUCYQ7Z3D6 616 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 OR4C6Q8NH72 309 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 ANKRD9Q96BM1 317 aaPredicted RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 TRAF4Q9BUZ4 470 aaPredicted RBP17.21■□□□□ 0.35
PDE6B-202ENST00000429163 COMMD3Q9UBI1 195 aa17.21■□□□□ 0.35
PDE6B-202ENST00000429163 DAPL1A0PJW8 107 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 PEPDP12955 493 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 HK1P19367 917 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 GABRA3P34903 492 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 CCR5P51681 352 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 QPRTQ15274 297 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 CARTPTQ16568 116 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 KIAA1324Q6UXG2 1013 aaKnown RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 Q6ZSR6 202 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ZNF550Q7Z398 422 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 Q8N402 240 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SLC37A3Q8NCC5 494 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SIMC1Q8NDZ2 872 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ENKURQ8TC29 256 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ST6GAL2Q96JF0 529 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ZNF578Q96N58 590 aaPredicted RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 TEAD3Q99594 435 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 KCNJ15Q99712 375 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 HRASLS2Q9NWW9 162 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 MSRAQ9UJ68 235 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 NOX1Q9Y5S8 564 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SCN3AQ9NY46 2000 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 PEX12O00623 359 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 PLA2G10O15496 165 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 LDB3O75112 727 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 DNAJB6O75190 326 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SLC2A5P22732 501 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 S100A1P23297 94 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SLC6A6P31641 620 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 PBX2P40425 430 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 MAP2K3P46734 347 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SF3A2Q15428 464 aaKnown RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SHHQ15465 462 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 PAMR1Q6UXH9 720 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 LRRC28Q86X40 367 aaPredicted RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 MS4A15Q8N5U1 240 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 ZFP41Q8N8Y5 198 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 PFN4Q8NHR9 129 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 FAM174AQ8TBP5 190 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 CCNL2Q96S94 520 aaPredicted RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 TTYH2Q9BSA4 534 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 TMEM43Q9BTV4 400 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 IFT27Q9BW83 186 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 MFRPQ9BY79 579 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SEMA6CQ9H3T2 930 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 RERGLQ9H628 205 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 C20orf141Q9NUB4 165 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 SERTAD3Q9UJW9 196 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 MRPS2Q9Y399 296 aaKnown RBP17.2■□□□□ 0.34
PDE6B-202ENST00000429163 N6AMT1Q9Y5N5 214 aa17.2■□□□□ 0.34
PDE6B-202ENST00000429163 TRBV23OR9-2A0A075B6M9 112 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 CENPXA8MT69 81 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 CBX7O95931 251 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 IGLV3-19P01714 112 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 CD1AP06126 327 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 MYL9P24844 172 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 TIGD3Q6B0B8 471 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 TMEM53Q6P2H8 277 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 PLET1Q6UQ28 207 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 C11orf74Q86VG3 221 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 OR5W2Q8NH69 310 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 PTP4A1Q93096 173 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 TIMP4Q99727 224 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 RNF32Q9H0A6 362 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 NKX2-4Q9H2Z4 354 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 EVA1BQ9NVM1 165 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 CLEC1BQ9P126 229 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 CA5BQ9Y2D0 317 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 TRANK1O15050 2925 aa17.19■□□□□ 0.34
PDE6B-202ENST00000429163 OR5K3A6NET4 321 aa17.18■□□□□ 0.34
PDE6B-202ENST00000429163 EPOPA6NHQ4 379 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms