RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ALPK1Q96QP1 1244 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 ANGPTL4Q9BY76 406 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 PTGES2Q9H7Z7 377 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 CPNE5Q9HCH3 593 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 TIMMDC1Q9NPL8 285 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 KLRF1Q9NZS2 232 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 ACAD8Q9UKU7 415 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 A4GNTQ9UNA3 340 aa9.46□□□□□ -0.9
MDC1-205ENST00000425072 CLDN24A6NM45 220 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 EFSO43281 561 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 HCRTR2O43614 444 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 DIRAS1O95057 198 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 GKN3PP0CG01 181 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ANXA8P13928 327 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ITPKBP27987 946 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 CASP3P42574 277 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ACAA2P42765 397 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 P2RX1P51575 399 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 CCL11P51671 97 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ZNF136P52737 540 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 UCNP55089 124 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 CDH12P55289 794 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 SUMO3P55854 103 aaPredicted RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 SPIBQ01892 262 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 OC90Q02509 493 aaPredicted RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 PIN1Q13526 163 aaPredicted RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 OR1Q1Q15612 314 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 MICAQ29983 383 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 WBP2NLQ6ICG8 309 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 SHQ1Q6PI26 577 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 PLEKHM3Q6ZWE6 761 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 TSEN54Q7Z6J9 526 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 LACC1Q8IV20 430 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 OFCC1Q8IZS5 231 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 AMER2Q8N7J2 671 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 FAM71CQ8NEG0 241 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 OR10G3Q8NGC4 313 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 OR4D11Q8NGI4 311 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 OR5W2Q8NH69 310 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 B4GALNT2Q8NHY0 566 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ADAMTS16Q8TE57 1224 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 GRHL3Q8TE85 626 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 PAQR8Q8TEZ7 354 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 GIPC3Q8TF64 312 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 RNF138Q8WVD3 245 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 HAS2Q92819 552 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 MPP4Q96JB8 637 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 NODALQ96S42 347 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 RBM4BQ9BQ04 359 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 RBM4Q9BWF3 364 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 COQ10BQ9H8M1 238 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ZNF556Q9HAH1 456 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 SACM1LQ9NTJ5 587 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 DNAJB12Q9NXW2 375 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 PPP4R1LQ9P1A2 415 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 CARD8Q9Y2G2 431 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 TESMINQ9Y4I5 508 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 PCDHGB6Q9Y5F9 930 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 ORC6Q9Y5N6 252 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 U3KQV3 271 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 MED13Q9UHV7 2174 aa9.45□□□□□ -0.9
MDC1-205ENST00000425072 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
MDC1-205ENST00000425072 HEATR5AQ86XA9 2040 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 SMG1Q96Q15 3661 aaKnown RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 CENPVL1A0A0U1RR11 272 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 A6NL46 340 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 FAM47E-STBD1D6RA91 191 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 J3KTA2 159 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 MASP2O00187 686 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 FFAR1O14842 300 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 FRS3O43559 492 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 TLX3O43711 291 aaPredicted RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 TPST2O60704 377 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 CCNB2O95067 398 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 NUDT14O95848 222 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 PNMTP11086 282 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 GP1BBP13224 206 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 CNR1P21554 472 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 FKBP2P26885 142 aaKnown RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 RYKP34925 604 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 CD96P40200 585 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 EIF2S3P41091 472 aaKnown RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 SLC1A3P43003 542 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 HTR3AP46098 478 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 IDH2P48735 452 aaKnown RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 MAP2K6P52564 334 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 EPS8Q12929 822 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 LRRC36Q1X8D7 754 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 DEFB109BQ30KR1 87 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 LPCAT4Q643R3 524 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 B3GNTL1Q67FW5 361 aaPredicted RBP9.44□□□□□ -0.9
MDC1-205ENST00000425072 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 ZNF605Q86T29 641 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 CYP4Z2PQ8N1L4 340 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 BEST3Q8N1M1 668 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 TMCO5AQ8N6Q1 288 aa9.44□□□□□ -0.9
MDC1-205ENST00000425072 OR52J3Q8NH60 311 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms