RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 METTL25Q8N6Q8 603 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 CNEP1R1Q8N9A8 125 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 TOR1AIP2Q8NFQ8 470 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 RFWD2Q8NHY2 731 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 FIG4Q92562 907 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 ZNF845Q96IR2 970 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-204ENST00000422344 OR52B2Q96RD2 323 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 RBM24Q9BX46 236 aaKnown RBP19.71■□□□□ 0.75
TRAF4-204ENST00000422344 PRRG4Q9BZD6 226 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 ZNF350Q9GZX5 532 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 PAQR5Q9NXK6 330 aaPredicted RBP19.71■□□□□ 0.75
TRAF4-204ENST00000422344 JKAMPQ9P055 326 aa19.71■□□□□ 0.75
TRAF4-204ENST00000422344 AKAP6Q13023 2319 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 A0A1W2PNV4 684 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 SERINC4A6NH21 518 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 ZNF264O43296 627 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 OIP5O43482 229 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 FCMRO60667 390 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 RAC1P63000 192 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 FOXF1Q12946 379 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 NDUFAF6Q330K2 333 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 GPAT3Q53EU6 434 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 PDSS1Q5T2R2 415 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 HEPHL1Q6MZM0 1159 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 FNDC9Q8TBE3 224 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 INPP5KQ9BT40 448 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 TMEM185BQ9H7F4 350 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 POLE3Q9NRF9 147 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 ZIM2Q9NZV7 527 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 ICAM5Q9UMF0 924 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 WDR45Q9Y484 360 aa19.7■□□□□ 0.74
TRAF4-204ENST00000422344 PCNX3Q9H6A9 2034 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 UQCRHLA0A096LP55 91 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 RFXANKO14593 260 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 ZNF195O14628 629 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 POLR3GO15318 223 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 EIF4E2O60573 245 aaKnown RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 CYP7B1O75881 506 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 SMNDC1O75940 238 aaKnown RBP eCLIP19.69■□□□□ 0.743e-7■■■■□ 24.8
TRAF4-204ENST00000422344 OPN1LWP04000 364 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 GSNP06396 782 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 LINGO3P0C6S8 592 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 H2AFXP16104 143 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 TXNL4AP83876 142 aaKnown RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 ZNF141Q15928 474 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 EPGNQ6UW88 154 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 ESPNLQ6ZVH7 1005 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 OLIG3Q7RTU3 272 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 RNF130Q86XS8 419 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 MIER2Q8N344 545 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 ROPN1LQ96C74 230 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 POM121Q96HA1 1249 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 NPAS1Q99742 590 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 RMND5AQ9H871 391 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 SDR39U1Q9NRG7 319 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 INTS9Q9NV88 658 aaKnown RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 CRIM1Q9NZV1 1036 aa19.69■□□□□ 0.74
TRAF4-204ENST00000422344 MCTS1Q9ULC4 181 aaKnown RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 GPC6Q9Y625 555 aaPredicted RBP19.69■□□□□ 0.74
TRAF4-204ENST00000422344 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 TUBAL3A6NHL2 446 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 GJE1A6NN92 205 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 KIAA0513O60268 411 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 TNFSF13O75888 250 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 SYNGR4O95473 234 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 ANP32DO95626 131 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 CSTAP01040 98 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 PSMA4P25789 261 aaKnown RBP19.68■□□□□ 0.74
TRAF4-204ENST00000422344 ELK4P28324 431 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 CDKN2CP42773 168 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 STX1BP61266 288 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 PPP2R2AP63151 447 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 SIRPAP78324 504 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 SORDQ00796 357 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 CBFBQ13951 182 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 FGFBP1Q14512 234 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 DNAJC14Q6Y2X3 702 aaPredicted RBP19.68■□□□□ 0.74
TRAF4-204ENST00000422344 EIF3MQ7L2H7 374 aaKnown RBP19.68■□□□□ 0.74
TRAF4-204ENST00000422344 LILRA2Q8N149 483 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 OR5W2Q8NH69 310 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 OR10D3Q8NH80 312 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 OR2V1Q8NHB1 315 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 FBXO27Q8NI29 283 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 POC1BQ8TC44 478 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 FAM222BQ8WU58 562 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 OIT3Q8WWZ8 545 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 NRGNQ92686 78 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 KLHDC3Q9BQ90 382 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 RNF122Q9H9V4 155 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 SLCO1B3Q9NPD5 702 aa19.68■□□□□ 0.74
TRAF4-204ENST00000422344 PRRC2AP48634 2157 aaKnown RBP19.68■□□□□ 0.74
TRAF4-204ENST00000422344 TNFSF11O14788 317 aa19.67■□□□□ 0.74
TRAF4-204ENST00000422344 UGT2B17O75795 530 aa19.67■□□□□ 0.74
TRAF4-204ENST00000422344 TGDSO95455 350 aa19.67■□□□□ 0.74
TRAF4-204ENST00000422344 KRT75O95678 551 aa19.67■□□□□ 0.74
TRAF4-204ENST00000422344 PLGP00747 810 aaPredicted RBP19.67■□□□□ 0.74
TRAF4-204ENST00000422344 GUSBP08236 651 aa19.67■□□□□ 0.74
TRAF4-204ENST00000422344 ADH6P28332 368 aa19.67■□□□□ 0.74
TRAF4-204ENST00000422344 DNAJA1P31689 397 aaKnown RBP19.67■□□□□ 0.74
TRAF4-204ENST00000422344 CPOXP36551 454 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms