RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 PDCD2Q16342 344 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 FLYWCH1Q4VC44 716 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 FNDC7Q5VTL7 733 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM198Q66K66 360 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SLC30A6Q6NXT4 461 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TMEM81Q6P7N7 255 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ANGPTL8Q6UXH0 198 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ZNF551Q7Z340 670 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 NUP54Q7Z3B4 507 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 WDR53Q7Z5U6 358 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SLC44A2Q8IWA5 706 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 EID3Q8N140 333 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 LIX1Q8N485 282 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 MARVELD2Q8N4S9 558 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ANKRD42Q8N9B4 389 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 FNDC5Q8NAU1 212 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 OR4N2Q8NGD1 307 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 OR5M9Q8NGP3 310 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ZFP28Q8NHY6 868 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 EFHD2Q96C19 240 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TUBGCP3Q96CW5 907 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 NTNG2Q96CW9 530 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 MTERF3Q96E29 417 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ELP4Q96EB1 424 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ZBED6CLQ96FA7 236 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 COL21A1Q96P44 957 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 OR14A2Q96R54 314 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SORT1Q99523 831 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 OSBPL11Q9BXB4 747 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 C20orf27Q9GZN8 174 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 UBQLN3Q9H347 655 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TP63Q9H3D4 680 aaPredicted RBP6.3□□□□□ -1.4
HMGN1-205ENST00000419378 EXO5Q9H790 373 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 GALNT9Q9HCQ5 603 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 PNPLA3Q9NST1 481 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 PNPOQ9NVS9 261 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 QPCTLQ9NXS2 382 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 KLRF1Q9NZS2 232 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 PPP4R1LQ9P1A2 415 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 SLC23A1Q9UHI7 598 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 ATP6V1HQ9UI12 483 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 TEX15Q9BXT5 2789 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 NINQ8N4C6 2090 aa6.3□□□□□ -1.4
HMGN1-205ENST00000419378 CACNA1CQ13936 2221 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 PRSS44E7EML9 344 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ICOSLGO75144 302 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 REM1O75628 298 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 TRAPPC6AO75865 159 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 HPNP05981 417 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 CD1AP06126 327 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 PRPS2P11908 318 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 CYP4B1P13584 511 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 DDX5P17844 614 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 EFNA1P20827 205 aaPredicted RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ACVR2AP27037 513 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 PTPN6P29350 595 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 IL12BP29460 328 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 KRT20P35900 424 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 RPL3P39023 403 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 DCTP40126 519 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 FRKP42685 505 aaPredicted RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 SLC1A6P48664 564 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 TRPC1P48995 793 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 MAGOHP61326 146 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 BST1Q10588 318 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ART3Q13508 389 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 EFR3AQ14156 821 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 CASP8Q14790 479 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 CDSNQ15517 529 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 GXYLT1Q4G148 440 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 RNF220Q5VTB9 566 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 HHATQ5VTY9 493 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 IL23RQ5VWK5 629 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 TIGD3Q6B0B8 471 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 XKRXQ6PP77 449 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 R3HCC1LQ7Z5L2 792 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 RPRMLQ8N4K4 120 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 WDSUB1Q8N9V3 476 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 OR7A2PQ8NGA2 310 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 FBXO30Q8TB52 745 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 MGARPQ8TDB4 240 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 RNF138Q8WVD3 245 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 SARAFQ96BY9 339 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 TLCD1Q96CP7 247 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 TMCO6Q96DC7 493 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 PPP1R36Q96LQ0 422 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 MS4A4EQ96PG1 132 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ADOQ96SZ5 270 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 PAIP2Q9BPZ3 127 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 LMF2Q9BU23 707 aaKnown RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 MRI1Q9BV20 369 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
HMGN1-205ENST00000419378 ZCCHC4Q9H5U6 513 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 TMBIM4Q9HC24 238 aa6.29□□□□□ -1.4
HMGN1-205ENST00000419378 Q9N2J8 555 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms