RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PTGER4P35408 488 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 GZMMP51124 257 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 MTPNP58546 118 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 BCL2A1Q16548 175 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 SLC25A53Q5H9E4 307 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 RPS26P11Q5JNZ5 115 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 GCNT6Q5T4J0 391 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 AAGABQ6PD74 315 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 C3P1Q6ZMU1 363 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 NCCRP1Q6ZVX7 275 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 EIF3MQ7L2H7 374 aaKnown RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 PTOV1Q86YD1 416 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 PM20D2Q8IYS1 436 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 EID3Q8N140 333 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 OR5W2Q8NH69 310 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 PIGQQ9BRB3 760 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 RSPO3Q9BXY4 272 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 KAT8Q9H7Z6 458 aaKnown RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 DNAJB12Q9NXW2 375 aaKnown RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 VDAC3Q9Y277 283 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 RPH3AQ9Y2J0 694 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 CHST2Q9Y4C5 530 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 A0A0G2JPF8 293 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 CLDN24A6NM45 220 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 EVPLLA8MZ36 301 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 HNRNPCL2B2RXH8 293 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 HNRNPCL3B7ZW38 293 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 HNRNPCL1O60812 293 aaKnown RBP16.85■□□□□ 0.29
PTCD3-204ENST00000418628 ADAM11O75078 769 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 CSTAP01040 98 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 DBIP07108 87 aaKnown RBP16.85■□□□□ 0.29
PTCD3-204ENST00000418628 THBS1P07996 1170 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 HNRNPCL4P0DMR1 293 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 COX4I1P13073 169 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 NID1P14543 1247 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 GCKP35557 465 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 CLDN15P56746 228 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 KCNJ10P78508 379 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 CYLC2Q14093 348 aaPredicted RBP16.85■□□□□ 0.29
PTCD3-204ENST00000418628 GNA13Q14344 377 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 ACSF3Q4G176 576 aaPredicted RBP16.85■□□□□ 0.29
PTCD3-204ENST00000418628 C1orf185Q5T7R7 199 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 RNF220Q5VTB9 566 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 RAET1LQ5VY80 246 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 ENPP6Q6UWR7 440 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 HMGN2P46Q86SG4 172 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 OR8J3Q8NGG0 315 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 BBS10Q8TAM1 723 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 WDR60Q8WVS4 1066 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 ITLN2Q8WWU7 325 aaPredicted RBP16.85■□□□□ 0.29
PTCD3-204ENST00000418628 LRRC58Q96CX6 371 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 UCN2Q96RP3 112 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 SLC39A3Q9BRY0 314 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.85■□□□□ 0.29
PTCD3-204ENST00000418628 FREM1Q5H8C1 2179 aa16.85■□□□□ 0.29
PTCD3-204ENST00000418628 AHRRA9YTQ3 701 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 KDM4EB2RXH2 506 aaPredicted RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 SHISA8B8ZZ34 492 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 GMFGO60234 142 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ZG16O60844 167 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 PGM3O95394 542 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ETS2P15036 469 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 PRKCAP17252 672 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ELK4P28324 431 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ADH6P28332 368 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF41P51814 821 aaPredicted RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 PCBP3P57721 371 aaKnown RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 EEF1A1P68104 462 aaKnown RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 CAPRIN1Q14444 709 aaKnown RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 TOMM34Q15785 309 aaPredicted RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 MRPL2Q5T653 305 aaKnown RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 FAM91A1Q658Y4 838 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 NANOGP8Q6NSW7 305 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 C8orf82Q6P1X6 216 aaPredicted RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF585AQ6P3V2 769 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 RPTNQ6XPR3 784 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF836Q6ZNA1 936 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 SEM1Q6ZVN7 128 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 SERPINA11Q86U17 422 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 CALHM3Q86XJ0 350 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 GRAMD2AQ8IUY3 354 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 PEX5LQ8IYB4 626 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 POU5F2Q8N7G0 328 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ZPLD1Q8TCW7 415 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 RCN3Q96D15 328 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 PSMG3-AS1Q96PY0 264 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 NANOGQ9H9S0 305 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF337Q9Y3M9 751 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 FLNBO75369 2602 aaKnown RBP16.84■□□□□ 0.29
PTCD3-204ENST00000418628 PKDREJQ9NTG1 2253 aa16.84■□□□□ 0.29
PTCD3-204ENST00000418628 LOC100653049A0A140TA62 436 aa16.83■□□□□ 0.28
PTCD3-204ENST00000418628 CDHR4A6H8M9 788 aa16.83■□□□□ 0.28
PTCD3-204ENST00000418628 GTPBP1O00178 669 aaKnown RBP16.83■□□□□ 0.28
PTCD3-204ENST00000418628 KRT34O76011 436 aa16.83■□□□□ 0.28
PTCD3-204ENST00000418628 FAM107AO95990 144 aa16.83■□□□□ 0.28
PTCD3-204ENST00000418628 UBTFL6P0CB48 400 aaPredicted RBP16.83■□□□□ 0.28
PTCD3-204ENST00000418628 PEPDP12955 493 aa16.83■□□□□ 0.28
PTCD3-204ENST00000418628 AGAP20933 346 aa16.83■□□□□ 0.28
PTCD3-204ENST00000418628 TCEA1P23193 301 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms