RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 NT5C3BQ969T7 300 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 C19orf60Q96EN9 201 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 SH3YL1Q96HL8 342 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 CPB2Q96IY4 423 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ELMO2Q96JJ3 720 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 C12orf42Q96LP6 360 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GLT1D1Q96MS3 346 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CCDC115Q96NT0 180 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 TSGA13Q96PP4 275 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 LGMNQ99538 433 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 FEVQ99581 238 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RAD9AQ99638 391 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RBM4BQ9BQ04 359 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 KCTD14Q9BQ13 255 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 FEM1AQ9BSK4 669 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 MTG1Q9BT17 334 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 TRIM62Q9BVG3 475 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RBM4Q9BWF3 364 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 TEX13BQ9BXU2 312 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 UGT2B28Q9BY64 529 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 OR2B2Q9GZK3 357 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 OR10A4Q9H209 315 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 TPK1Q9H3S4 243 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 POMKQ9H5K3 350 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 RPAP3Q9H6T3 665 aaPredicted RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 DBNDD1Q9H9R9 158 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 NANOGQ9H9S0 305 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CAB39LQ9H9S4 337 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 FANCEQ9HB96 536 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 DIABLOQ9NR28 239 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 IARS2Q9NSE4 1012 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 GPATCH2LQ9NWQ4 482 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 COMMD8Q9NX08 183 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 GDAP2Q9NXN4 497 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CCDC167Q9P0B6 97 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 C5AR2Q9P296 337 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 MTRRQ9UBK8 725 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 WARS2Q9UGM6 360 aaKnown RBP2.37□□□□□ -2.03
VPS41-206ENST00000418457 C3orf18Q9UK00 162 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 SATB2Q9UPW6 733 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 AURKCQ9UQB9 309 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ERVW-1Q9UQF0 538 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 PDE10AQ9Y233 779 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 TPRKBQ9Y3C4 175 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 CCL27Q9Y4X3 112 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 ORC6Q9Y5N6 252 aa2.37□□□□□ -2.03
VPS41-206ENST00000418457 COL1A2P08123 1366 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 SYCE1LA8MT33 242 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 ZNF99A8MXY4 864 aaPredicted RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 FAM25AB3EWG3 89 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 FAM25CB3EWG5 89 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 FAM25GB3EWG6 89 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 G3V2T6 193 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 H0Y626 953 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 J3QRK9 145 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 NR5A2O00482 541 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 CLDN4O14493 209 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 AZIN1O14977 448 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 KMOO15229 486 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 INPP4BO15327 924 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 SLC7A4O43246 635 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 BCAS1O75363 584 aaPredicted RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 GRAP2O75791 330 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 UPK1BO75841 260 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 MYO1DO94832 1006 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 SNX4O95219 450 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 TRIM16O95361 564 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 SEC24AO95486 1093 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 NADKO95544 446 aaPredicted RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 EML2O95834 649 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 PGK1P00558 417 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 APOA1P02647 267 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 CHRNA1P02708 482 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 KRT8P05787 483 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 HMBSP08397 361 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 GNAO1P09471 354 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 TFPTP0C1Z6 253 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 TRAPPC2P0DI81 140 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 TRAPPC2BP0DI82 140 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 CXCL8P10145 99 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 SAGP10523 405 aaPredicted RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 IRF2P14316 349 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 GNB3P16520 340 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 IL1RNP18510 177 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 NELFEP18615 380 aaKnown RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 CD22P20273 847 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 CYP3A5P20815 502 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 CCNCP24863 283 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 AXLP30530 894 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 S100A5P33763 92 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 UGT2B10P36537 528 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 OPRL1P41146 370 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 WNT5AP41221 380 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 RGS7P49802 495 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 GSK3BP49841 420 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 SULT1E1P49888 294 aa2.36□□□□□ -2.03
VPS41-206ENST00000418457 NR0B1P51843 470 aaKnown RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 CRIP2P52943 208 aaPredicted RBP2.36□□□□□ -2.03
VPS41-206ENST00000418457 PLA2G16P53816 162 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms