RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ASB5Q8WWX0 329 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 SLC35B4Q969S0 331 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 LRRC58Q96CX6 371 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 CCDC120Q96HB5 630 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 DMRTA2Q96SC8 542 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 ZNF607Q96SK3 696 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 EVA1AQ9H8M9 152 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 ARMCX1Q9P291 453 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 VDAC3Q9Y277 283 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 PRRC2CQ9Y520 2896 aaKnown RBP13.26□□□□□ -0.29
LIMS1-206ENST00000414829 HRH3Q9Y5N1 445 aa13.26□□□□□ -0.29
LIMS1-206ENST00000414829 SVILO95425 2214 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 OR2M5A3KFT3 312 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 PRAMEF27A3QJZ7 478 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 WIPF3A6NGB9 483 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 CD8B2A6NJW9 211 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 GMFGO60234 142 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 SERPINB7O75635 380 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 CYP7B1O75881 506 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 FAM107AO95990 144 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ZNF708P17019 499 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 FKBP2P26885 142 aaKnown RBP13.25□□□□□ -0.29
LIMS1-206ENST00000414829 PGM1P36871 562 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 LHX2P50458 406 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 SCARB2Q14108 478 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ACSF3Q4G176 576 aaPredicted RBP13.25□□□□□ -0.29
LIMS1-206ENST00000414829 EMC4Q5J8M3 183 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 PDSS1Q5T2R2 415 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ERICH5Q6P6B1 374 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ARSKQ6UWY0 536 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 OR52P1PQ8NH57 321 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 WDYHV1Q96HA8 205 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ZFP3Q96NJ6 502 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 LRRC37BQ96QE4 947 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 RUBCNLQ9H714 662 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 CALHM2Q9HA72 323 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 ZNF443Q9Y2A4 671 aaPredicted RBP13.25□□□□□ -0.29
LIMS1-206ENST00000414829 SPIN1Q9Y657 262 aaPredicted RBP13.25□□□□□ -0.29
LIMS1-206ENST00000414829 RELNP78509 3460 aa13.25□□□□□ -0.29
LIMS1-206ENST00000414829 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 H3BML4 177 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 ETV2O00321 342 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-206ENST00000414829 FAAHO00519 579 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 FBP2O00757 339 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 DNAJA2O60884 412 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 KRT34O76011 436 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 PGM3O95394 542 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 LINGO3P0C6S8 592 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 FCGR2AP12318 317 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 CHRNB4P30926 498 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 PRKAR1BP31321 381 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 HTR3AP46098 478 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 MTPNP58546 118 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 B3GALT5-AS1P59052 145 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 RAC1P63000 192 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 EEF1A1P68104 462 aaKnown RBP13.24□□□□□ -0.29
LIMS1-206ENST00000414829 SELENBP1Q13228 472 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 MAPK14Q16539 360 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 SLC25A53Q5H9E4 307 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 MRPL2Q5T653 305 aaKnown RBP13.24□□□□□ -0.29
LIMS1-206ENST00000414829 RIPPLY2Q5TAB7 128 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 EEF1A1P5Q5VTE0 462 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 NSUN5P2Q63ZY6 315 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 C3orf33Q6P1S2 294 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 CBLN3Q6UW01 205 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 ZNF550Q7Z398 422 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 NET1Q7Z628 596 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-206ENST00000414829 PIGWQ7Z7B1 504 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 GRAMD2AQ8IUY3 354 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 ZNF563Q8TA94 476 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 SLC25A43Q8WUT9 341 aaPredicted RBP13.24□□□□□ -0.29
LIMS1-206ENST00000414829 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 TM9SF2Q99805 663 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 ECSITQ9BQ95 431 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 TTYH2Q9BSA4 534 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 KAT8Q9H7Z6 458 aaKnown RBP13.24□□□□□ -0.29
LIMS1-206ENST00000414829 EFCAB1Q9HAE3 211 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 SERINC1Q9NRX5 453 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 FAM53CQ9NYF3 392 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 TNFRSF10DQ9UBN6 386 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 KCNE5Q9UJ90 142 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 SLC13A4Q9UKG4 626 aa13.24□□□□□ -0.29
LIMS1-206ENST00000414829 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 CENPVL1A0A0U1RR11 272 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 CDHR4A6H8M9 788 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 HSPB2A8KAH6 182 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 C17orf51A8MQB3 221 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 B4DXG7 233 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 ZG16O60844 167 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 SHOX2O60902 331 aaPredicted RBP13.23□□□□□ -0.29
LIMS1-206ENST00000414829 EPPINO95925 133 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 C1QCP02747 245 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 PABPC4LP0CB38 370 aaKnown RBP13.23□□□□□ -0.29
LIMS1-206ENST00000414829 COX4I1P13073 169 aa13.23□□□□□ -0.29
LIMS1-206ENST00000414829 PRKCAP17252 672 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms