RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 EPPINO95925 133 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 NCK1P16333 377 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 SRD5A2P31213 254 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 TOMM34Q15785 309 aaPredicted RBP27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 RNF220Q5VTB9 566 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 PATL1Q86TB9 770 aaKnown RBP27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 FIG4Q92562 907 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 NPAS1Q99742 590 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 TAS2R10Q9NYW0 307 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 ZGRF1Q86YA3 2104 aa27.77■■■□□ 2.04
CSNK1E-206ENST00000413574 SHISA8B8ZZ34 492 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 GSTA4O15217 222 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 GKN3PP0CG01 181 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 RYKP34925 604 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 IGFBP7Q16270 282 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 OR5M1Q8NGP8 315 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 OR14L1PQ8NHC6 308 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 OR2B2Q9GZK3 357 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 LDAHQ9H6V9 325 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 ACKR4Q9NPB9 350 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 ZNF462Q96JM2 2506 aa27.76■■■□□ 2.03
CSNK1E-206ENST00000413574 ANKUB1A6NFN9 424 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 CXCR6O00574 342 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 FRS3O43559 492 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 DNAJA2O60884 412 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 HK1P19367 917 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 PRKAR1BP31321 381 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 DUSP7Q16829 419 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 LRRC23Q53EV4 343 aaPredicted RBP27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 OR5W2Q8NH69 310 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 GPR119Q8TDV5 335 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 HHATLQ9HCP6 504 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 TNFRSF10DQ9UBN6 386 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 SLC6A5Q9Y345 797 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 NBASA2RRP1 2371 aa27.75■■■□□ 2.03
CSNK1E-206ENST00000413574 WISP1O95388 367 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 IGHG3P01860 377 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 HSD17B1P14061 328 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 KDELR2P33947 212 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 TRILQ7L0X0 811 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 TOR1AIP2Q8NFQ8 470 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 CLPTM1LQ96KA5 538 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 MED17Q9NVC6 651 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 RELNP78509 3460 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 TRGV5A0A0B4J1U4 118 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 AP3D1O14617 1153 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 GYG2O15488 501 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 HTR1EP28566 365 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 C19orf57Q0VDD7 668 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 KRTCAP3Q53RY4 240 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 DHRS4L2Q6PKH6 230 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 GPR32P1Q8NGA4 272 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 SLC26A7Q8TE54 656 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 WFDC6Q9BQY6 131 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 EXO5Q9H790 373 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 EXOSC3Q9NQT5 275 aaKnown RBP27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 PLSCR2Q9NRY7 297 aa27.74■■■□□ 2.03
CSNK1E-206ENST00000413574 A0A1B0GTH9 108 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 PDE5AO76074 875 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 PRG2P13727 222 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 EDN3P14138 238 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 ZNF41P51814 821 aaPredicted RBP27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 GTF3C1Q12789 2109 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 CBFBQ13951 182 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 GANABQ14697 944 aaKnown RBP27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 FGD2Q7Z6J4 655 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 MIB2Q96AX9 1013 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 BTBD10Q9BSF8 475 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 THTPAQ9BU02 230 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 PINK1Q9BXM7 581 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 PCDHAC1Q9H158 963 aa27.73■■■□□ 2.03
CSNK1E-206ENST00000413574 LINGO3P0C6S8 592 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 GGT1P19440 569 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 CD247P20963 164 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 SUMO3P55854 103 aaPredicted RBP27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 HOXC5Q00444 222 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 PLPPR5Q32ZL2 321 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 GFRALQ6UXV0 394 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 LSRQ86X29 649 aaPredicted RBP27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 GRAMD2AQ8IUY3 354 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 CHERPQ8IWX8 916 aaKnown RBP27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 GHDCQ8N2G8 530 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 OR10Q1Q8NGQ4 319 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 SPRR3Q9UBC9 169 aa27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 MRPS18CQ9Y3D5 142 aaKnown RBP27.72■■■□□ 2.03
CSNK1E-206ENST00000413574 KCNJ5P48544 419 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 B3GALT5-AS1P59052 145 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 RAET1LQ5VY80 246 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 GLYATQ6IB77 296 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 TNIP2Q8NFZ5 429 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 NEIL3Q8TAT5 605 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 ARMC7Q9H6L4 198 aa27.71■■■□□ 2.03
CSNK1E-206ENST00000413574 TMEM229AB2RXF0 380 aa27.7■■■□□ 2.03
CSNK1E-206ENST00000413574 EBAG9O00559 213 aa27.7■■■□□ 2.03
CSNK1E-206ENST00000413574 QPRTQ15274 297 aa27.7■■■□□ 2.03
CSNK1E-206ENST00000413574 CYBRD1Q53TN4 286 aa27.7■■■□□ 2.03
CSNK1E-206ENST00000413574 PRPF19Q9UMS4 504 aaKnown RBP27.7■■■□□ 2.03
CSNK1E-206ENST00000413574 CFAP73A6NFT4 308 aa27.7■■■□□ 2.02
CSNK1E-206ENST00000413574 ACAA2P42765 397 aaKnown RBP27.7■■■□□ 2.02
CSNK1E-206ENST00000413574 MRPL49Q13405 166 aaKnown RBP27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms