RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 AGPAT4Q9NRZ5 378 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SEC14L4Q9UDX3 406 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 DCDC2BA2VCK2 349 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TBX19O60806 448 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 B3GALT4O96024 378 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 WNT1P04628 370 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CD46P15529 392 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 MYL9P24844 172 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 HTR3AP46098 478 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SSR4P51571 173 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 MFSD12Q6NUT3 480 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 MAMSTRQ6ZN01 415 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CXXC5Q7LFL8 322 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 PTRH1Q86Y79 214 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ALDH16A1Q8IZ83 802 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ADGRG5Q8IZF4 528 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 NETO1Q8TDF5 533 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SGTBQ96EQ0 304 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SMURF2Q9HAU4 748 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 LIN7CQ9NUP9 197 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 UPB1Q9UBR1 384 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 RIMS3Q9UJD0 308 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 PPIEQ9UNP9 301 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 DNAH14Q0VDD8 3507 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 OR14I1A6ND48 311 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 WRBO00258 174 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CTSVO60911 334 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 DBTP11182 482 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CKMT1AP12532 417 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 MAOAP21397 527 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ACVR2AP27037 513 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 PTGES3Q15185 160 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ALG10BQ5I7T1 473 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 C6orf141Q5SZD1 244 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 RAET1LQ5VY80 246 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SLC30A6Q6NXT4 461 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TMEM53Q6P2H8 277 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 LAPTM4BQ86VI4 370 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SPNS2Q8IVW8 549 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SPERTQ8NA61 448 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 OR8H1Q8NGG4 311 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 HIPK2Q9H2X6 1198 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TMEM38AQ9H6F2 299 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 BRD7Q9NPI1 651 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TAS2R7Q9NYW3 318 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 KCMF1Q9P0J7 381 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 A0A087WV62 115 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 C19orf67A6NJJ6 358 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 OR6C76A6NM76 312 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 FAM227AF5H4B4 570 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TFECO14948 347 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ETHE1O95571 254 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CHRNB4P30926 498 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ARRB2P32121 409 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 PCDH1Q08174 1060 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SF3A2Q15428 464 aaKnown RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 CBLL1Q75N03 491 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 SLC51BQ86UW2 128 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 RBP7Q96R05 134 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 TREX2Q9BQ50 279 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 C11orf16Q9NQ32 467 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 PRDM7Q9NQW5 492 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 ABCD2Q9UBJ2 740 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 BOKQ9UMX3 212 aaPredicted RBP7.94□□□□□ -1.14
SYNE1-211ENST00000413186 PCDHGB2Q9Y5G2 931 aa7.94□□□□□ -1.14
SYNE1-211ENST00000413186 A0A0A6YYD5 115 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 CDC14CA4D256 554 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 B8ZZF3 427 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 HCRTR1O43613 425 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 GP1BAP07359 652 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ZNF883P0CG24 379 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 GM2AP17900 193 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 F8A1P23610 371 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 DCTP40126 519 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 KCNJ10P78508 379 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 KCNAB2Q13303 367 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PMS2P3Q13401 168 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 TPRG1LQ5T0D9 272 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 BORAQ6PGQ7 559 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 SMARCD3Q6STE5 483 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PIK3R3Q92569 461 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 UTP23Q9BRU9 249 aaKnown RBP7.93□□□□□ -1.14
SYNE1-211ENST00000413186 TSSK6Q9BXA6 273 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 TNFRSF12AQ9NP84 129 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 A4GALTQ9NPC4 353 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PTPRDP23468 1912 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 WWP2O00308 870 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 ACOX3O15254 700 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 OR2T1O43869 369 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 FGF17O60258 216 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PRR35P0CG20 571 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 PRKACAP17612 351 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 CD22P20273 847 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 DLSTP36957 453 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 CASP6P55212 293 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 RUNX2Q13950 521 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 LTB4RQ15722 352 aa7.93□□□□□ -1.14
SYNE1-211ENST00000413186 TSPYL5Q86VY4 417 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms