RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NLE1Q9NVX2 485 aaPredicted RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 PSORS1C1Q9UIG5 152 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SLC7A11Q9UPY5 501 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 CHST2Q9Y4C5 530 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 STRCQ7RTU9 1775 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 A4D1N5 150 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZNF264O43296 627 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 KIAA0513O60268 411 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 MOSPD3O75425 235 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ATP6AP2O75787 350 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 NDUFB10O96000 172 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SYPP08247 313 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 AKAP5P24588 427 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 GJA4P35212 333 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 MNDAP41218 407 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 GRK6P43250 576 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 FHITP49789 147 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 CEBPGP53567 150 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 RAG2P55895 527 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZP1P60852 638 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 NFKB2Q00653 900 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 HEPACAMQ14CZ8 416 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 C5orf64Q2M2E5 130 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 KHDRBS2Q5VWX1 349 aaKnown RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 APOBEC3HQ6NTF7 200 aaKnown RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 TMPRSS7Q7RTY8 843 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SYT9Q86SS6 491 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 CLDN22Q8N7P3 220 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 DNAAF1Q8NEP3 725 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 OR1L6Q8NGR2 347 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 FIBINQ8TAL6 211 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 FAM222BQ8WU58 562 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 TMEM203Q969S6 136 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ERGIC1Q969X5 290 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 KLRG1Q96E93 195 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 PGAM5Q96HS1 289 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 TAAR9Q96RI9 348 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 GABARAPL3Q9BY60 117 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 LRRC3Q9BY71 257 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 TASP1Q9H6P5 420 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SFXN1Q9H9B4 322 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ACKR4Q9NPB9 350 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 HIF1ANQ9NWT6 349 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 GNG8Q9UK08 70 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 CMAHPQ9Y471 501 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SLCO1B1Q9Y6L6 691 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZNF831Q5JPB2 1677 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZNF541Q9H0D2 1346 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 OR2T1O43869 369 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SUSD5O60279 629 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 DLX3O60479 287 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 GGCTO75223 188 aaKnown RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 MT-ND4LP03901 98 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 MT-ND5P03915 603 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 HMBSP08397 361 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 TBPP20226 339 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 C4BPBP20851 252 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SDC4P31431 198 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 RCAN2Q14206 197 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 PIP5KL1Q5T9C9 394 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZNF660Q6AZW8 331 aaPredicted RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 FSTL4Q6MZW2 842 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 USP17L6PQ6QN14 398 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SLC22A25Q6T423 547 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 FAM131AQ6UXB0 335 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 GRINAQ7Z429 371 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 MRPL52Q86TS9 123 aaKnown RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 TMEM135Q86UB9 458 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 SCN4BQ8IWT1 228 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 KLHDC8BQ8IXV7 354 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 AQP11Q8NBQ7 271 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 CYP2W1Q8TAV3 490 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 APH1BQ8WW43 257 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 VPS25Q9BRG1 176 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZBTB3Q9H5J0 574 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 KRCC1Q9NPI7 259 aaPredicted RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 SEMA5BQ9P283 1151 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZNF223Q9UK11 482 aaPredicted RBP4.88□□□□□ -1.63
HERC4-205ENST00000412272 OR52A1Q9UKL2 312 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ZFP30Q9Y2G7 519 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 ATG4BQ9Y4P1 393 aa4.88□□□□□ -1.63
HERC4-205ENST00000412272 A0A0J9YYE9 177 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 USP17L3A6NCW0 530 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 ZNF726A6NNF4 738 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 ALG1L2C9J202 215 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 PRR23D1E9PI22 279 aaPredicted RBP4.87□□□□□ -1.63
HERC4-205ENST00000412272 ACKR2O00590 384 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 PSMD10O75832 226 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 PRR23D2P0DMB1 279 aaPredicted RBP4.87□□□□□ -1.63
HERC4-205ENST00000412272 SELEP16581 610 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 MPZP25189 248 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 IRF8Q02556 426 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 SF3A2Q15428 464 aaKnown RBP4.87□□□□□ -1.63
HERC4-205ENST00000412272 SNRNP35Q16560 246 aaKnown RBP4.87□□□□□ -1.63
HERC4-205ENST00000412272 HAGHQ16775 308 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 GOLGA7BQ2TAP0 167 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 MRNIPQ6NTE8 343 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 H3F3CQ6NXT2 135 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 CACUL1Q86Y37 369 aa4.87□□□□□ -1.63
HERC4-205ENST00000412272 OR2T11Q8NH01 316 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms