RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 PCDHGB2Q9Y5G2 931 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACEP12821 1306 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 RPGRIP1LQ68CZ1 1315 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 RALGAPA2Q2PPJ7 1873 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 PTPN23Q9H3S7 1636 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 VWA8A3KMH1 1905 aa-1.99□□□□□ -2.73
RNU4-88P-201ENST00000411220 GPATCH8Q9UKJ3 1502 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MGAMO43451 1857 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ADGRB2O60241 1585 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 A0A087WVE0 104 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGHV3-20A0A0C4DH32 117 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRBV30A0A0K0K1B3 111 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 LCE6AA0A183 80 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 IGLON5A6NGN9 336 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ARHGAP42A6NI28 874 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 EFCAB7A8K855 629 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 GGTLC3B5MD39 225 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 H0Y626 953 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 J3QQQ9 107 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CHEK1O14757 476 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RAD51BO15315 384 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACSL4O60488 711 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 KLF7O75840 302 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CLDN7O95471 211 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ANGPTL1O95841 491 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CAPN1P07384 714 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SOD3P08294 240 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MMP7P09237 267 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MGST1P10620 155 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DRD1P21728 446 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 IBSPP21815 317 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CD1CP29017 333 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PRDX3P30048 256 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PEBP1P30086 187 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 BRS3P32247 399 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 GARSP41250 739 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 TECP42680 631 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MAGEA2P43356 314 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC15A1P46059 708 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR1G1P47890 313 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 GSSP48637 474 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACADVLP49748 655 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RGS7P49802 495 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 AKR1D1P51857 326 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DLX1P56177 255 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RPL26P61254 145 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ESRRGP62508 458 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SCRN3Q0VDG4 424 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 EPS8Q12929 822 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 UAP1Q16222 522 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DUSP28Q4G0W2 176 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RUNDC3AQ59EK9 446 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PDZD11Q5EBL8 140 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 PAGE3Q5JUK9 113 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ODR4Q5SWX8 454 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CD164L2Q6UWJ8 174 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RAD9BQ6WBX8 426 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ACP7Q6ZNF0 438 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 TEX43Q6ZNM6 134 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ENOSF1Q7L5Y1 443 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SHFQ7M4L6 423 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DAZ4Q86SG3 579 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 LONP2Q86WA8 852 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CKAP2LQ8IYA6 745 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 VPS52Q8N1B4 723 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR2L13Q8N349 312 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RASGEF1CQ8N431 466 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ALLCQ8N6M5 410 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF713Q8N859 430 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SPATA4Q8NEY3 305 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RDM1Q8NG50 284 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 OR4C16Q8NGL9 310 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 LINC01560Q8TB33 94 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 C17orf50Q8WW18 174 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 UBXN4Q92575 508 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 DAZLQ92904 295 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 UPRTQ96BW1 309 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SLC25A44Q96H78 314 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ERO1AQ96HE7 468 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CNDP1Q96KN2 507 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 FAM167AQ96KS9 214 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 NOL4LQ96MY1 436 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZFP3Q96NJ6 502 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 RCHY1Q96PM5 261 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SMIM14Q96QK8 99 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRIB3Q96RU7 358 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CAMK2N2Q96S95 79 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 NKX3-1Q99801 234 aaPredicted RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 SH3GL3Q99963 347 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 KXD1Q9BQD3 176 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 CNPY3Q9BT09 278 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 ZNF426Q9BUY5 554 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 MRPL9Q9BYD2 267 aaKnown RBP-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 NFKBIZQ9BYH8 718 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 GPR63Q9BZJ6 419 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 TGIF2Q9GZN2 237 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 IL22Q9GZX6 179 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 Q9H3A6 140 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 FAM83DQ9H4H8 585 aa-2□□□□□ -2.73
RNU4-88P-201ENST00000411220 TRABDQ9H4I3 376 aa-2□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms