RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 PTAFRP25105 342 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 SFTPDP35247 375 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 HSD17B3P37058 310 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 PRIM2P49643 509 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 PRKAG1P54619 331 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 MRPS25P82663 173 aaKnown RBP6.88□□□□□ -1.31
LSM5-202ENST00000409292 VLDLRP98155 873 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 GUCY2DQ02846 1103 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 SLC18A2Q05940 514 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 ZNF239Q16600 458 aaKnown RBP6.88□□□□□ -1.31
LSM5-202ENST00000409292 TMEM44Q2T9K0 475 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 GRAMD1BQ3KR37 738 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 GLE1Q53GS7 698 aaKnown RBP6.88□□□□□ -1.31
LSM5-202ENST00000409292 TIMM23BQ5SRD1 257 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 FAM166AQ6J272 317 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 TFAP2EQ6VUC0 442 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 C22orf34Q6ZV56 151 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 FCRLAQ7L513 359 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 MTERF4Q7Z6M4 381 aaKnown RBP6.88□□□□□ -1.31
LSM5-202ENST00000409292 DTX2Q86UW9 622 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 LCA5Q86VQ0 697 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 GABRG1Q8N1C3 465 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 OR2L13Q8N349 312 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 COX18Q8N8Q8 333 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 KBTBD8Q8NFY9 601 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 FAM76AQ8TAV0 307 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 RNF128Q8TEB7 428 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 PROX1Q92786 737 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 ELP4Q96EB1 424 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 CCDC126Q96EE4 140 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 ZHX1-C8orf76Q96EF9 292 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 SH3YL1Q96HL8 342 aaPredicted RBP6.88□□□□□ -1.31
LSM5-202ENST00000409292 C1QTNF3Q9BXJ4 246 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 EBPLQ9BY08 206 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 HOXD1Q9GZZ0 328 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 ACSS3Q9H6R3 686 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 FKRPQ9H9S5 495 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 SERINC1Q9NRX5 453 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 CBLN4Q9NTU7 201 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 MED17Q9NVC6 651 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 TAS2R7Q9NYW3 318 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 GRHL1Q9NZI5 618 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 EMC3Q9P0I2 261 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 FKBP7Q9Y680 259 aa6.88□□□□□ -1.31
LSM5-202ENST00000409292 A0A0J9YW62 118 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 A0A1W2PQD3 144 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 A8MT66 165 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 POC1B-GALNT4F8VUJ3 575 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ABCD4O14678 606 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 PDPK1O15530 556 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 LMX1BO60663 402 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 NME6O75414 186 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 GCM2O75603 506 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 OXSR1O95747 527 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 OPN1LWP04000 364 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 KRT16P08779 473 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 USF1P22415 310 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 TTKP33981 857 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 FABP6P51161 128 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 MANFP55145 182 aaKnown RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 SUMO3P55854 103 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 C21orf58P58505 322 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ZNF844Q08AG5 666 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 C2orf54Q08AI8 447 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 HSPB3Q12988 150 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 LCP2Q13094 533 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 PLPPR5Q32ZL2 321 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ARL13AQ5H913 290 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 MFSD12Q6NUT3 480 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ZNF544Q6NX49 715 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ZCCHC12Q6PEW1 402 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 Q6ZS46 218 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 Q6ZT83 130 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 TUSC5Q8IXB3 177 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 PLD6Q8N2A8 252 aaKnown RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 UBE2J2Q8N2K1 259 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 MUC15Q8N387 334 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 GATSQ8NAP1 163 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 TOR1AIP2Q8NFQ8 470 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.87□□□□□ -1.311e-15■■■■□ 20.7
LSM5-202ENST00000409292 PHOSPHO1Q8TCT1 267 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ABHD3Q8WU67 409 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 JADE3Q92613 823 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 APIPQ96GX9 242 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 METTL2AQ96IZ6 378 aaKnown RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 ADGRG7Q96K78 797 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 AMDHD1Q96NU7 426 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 MS4A4EQ96PG1 132 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 DHRS9Q9BPW9 319 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 C19orf24Q9BVV8 132 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 CACNG6Q9BXT2 260 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 ACPTQ9BZG2 426 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 TRIM2Q9C040 744 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 GLIPR2Q9H4G4 154 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 MYNNQ9NPC7 610 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 SIRT5Q9NXA8 310 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 FLRT3Q9NZU0 649 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 B3GALT5Q9Y2C3 310 aa6.87□□□□□ -1.31
LSM5-202ENST00000409292 SPIN1Q9Y657 262 aaPredicted RBP6.87□□□□□ -1.31
LSM5-202ENST00000409292 IGHV4-30-2A0A087WSY4 118 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms