RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 KLHL26Q53HC5 615 aa17.46■□□□□ 0.39
USP39-202ENST00000409025 SYT14P1Q58G82 188 aa17.46■□□□□ 0.39
USP39-202ENST00000409025 BCDIN3DQ7Z5W3 292 aaKnown RBP17.46■□□□□ 0.39
USP39-202ENST00000409025 ZNF440Q8IYI8 595 aa17.46■□□□□ 0.39
USP39-202ENST00000409025 WDR36Q8NI36 951 aaKnown RBP17.46■□□□□ 0.39
USP39-202ENST00000409025 STT3BQ8TCJ2 826 aa17.46■□□□□ 0.39
USP39-202ENST00000409025 TIMMDC1Q9NPL8 285 aa17.46■□□□□ 0.39
USP39-202ENST00000409025 SIDT1Q9NXL6 827 aaKnown RBP17.46■□□□□ 0.39
USP39-202ENST00000409025 IGLV3-12A0A075B6K2 115 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SNTNA6NMZ2 147 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 KPNA4O00629 521 aaPredicted RBP17.45■□□□□ 0.38
USP39-202ENST00000409025 TIAF1O95411 115 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 HBQ1P09105 142 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 NR4A1P22736 598 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 RBM34P42696 430 aaKnown RBP17.45■□□□□ 0.38
USP39-202ENST00000409025 NCF4Q15080 339 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 TIGD6Q17RP2 521 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 NKAIN1Q4KMZ8 207 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 ALG10BQ5I7T1 473 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 PHF19Q5T6S3 580 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 PWWP2BQ6NUJ5 590 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SLC30A6Q6NXT4 461 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 ULK3Q6PHR2 472 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 CADM2Q8N3J6 435 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 OR1N1Q8NGS0 311 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 FGF11Q92914 225 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 BPIFA2Q96DR5 249 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 TMEM80Q96HE8 168 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 ZNF582Q96NG8 517 aaPredicted RBP17.45■□□□□ 0.38
USP39-202ENST00000409025 SLC24A3Q9HC58 644 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 C20orf141Q9NUB4 165 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 FER1L5A0AVI2 2057 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 TMX2-CTNND1H3BSU7 103 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SCDO00767 359 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 ZGLP1P0C6A0 271 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 MAKP20794 623 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 CTBP2P56545 445 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 EBPQ15125 230 aaKnown RBP17.45■□□□□ 0.38
USP39-202ENST00000409025 CTF1Q16619 201 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 PGGHGQ32M88 737 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 PRR23CQ6ZRP0 262 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SHISA6Q6ZSJ9 500 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 TMPRSS11FQ6ZWK6 438 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SLC29A4Q7RTT9 530 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 BMP8AQ7Z5Y6 402 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SLC38A9Q8NBW4 561 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 OR2T33Q8NG76 320 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 OR4Q3Q8NH05 313 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 BRIX1Q8TDN6 353 aaKnown RBP17.45■□□□□ 0.38
USP39-202ENST00000409025 PLEKHA8Q96JA3 519 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SAMD8Q96LT4 415 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 ATP13A2Q9NQ11 1180 aa17.45■□□□□ 0.38
USP39-202ENST00000409025 SEC16AO15027 2179 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 COL6A3P12111 3177 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 OR6C76A6NM76 312 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 UTS2O95399 124 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 BCL10O95999 233 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 PTHP01270 115 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 CD36P16671 472 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 ADH7P40394 386 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 COPZ1P61923 177 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 DCDP81605 110 aaKnown RBP17.44■□□□□ 0.38
USP39-202ENST00000409025 NDUFAF6Q330K2 333 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 RPL13AP3Q6NVV1 102 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 LANCL3Q6ZV70 420 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 ZNF367Q7RTV3 350 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 PPP1R3BQ86XI6 285 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 C9orf40Q8IXQ3 194 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 OR52L1Q8NGH7 329 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 FANK1Q8TC84 345 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 OR52D1Q9H346 318 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 MED17Q9NVC6 651 aa17.44■□□□□ 0.38
USP39-202ENST00000409025 M0R082 166 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 HMGN1P05114 100 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 ZNF182P17025 639 aaPredicted RBP17.43■□□□□ 0.38
USP39-202ENST00000409025 LCN1P31025 176 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 CSTF2P33240 577 aaKnown RBP eCLIP17.43■□□□□ 0.38
USP39-202ENST00000409025 TGFBR2P37173 567 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 AQP6Q13520 282 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 LPAL2Q16609 132 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 FAAH2Q6GMR7 532 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 ZNF426Q9BUY5 554 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 TAS2R16Q9NYV7 291 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 GPR52Q9Y2T5 361 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 EFCAB9A8MZ26 197 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 SLC22A1O15245 554 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 SURF4O15260 269 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 PRODHO43272 600 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 REM1O75628 298 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 RCBTB2O95199 551 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 CH25HO95992 272 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 HEXBP07686 556 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 SAGP10523 405 aaPredicted RBP17.43■□□□□ 0.38
USP39-202ENST00000409025 BMP7P18075 431 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 LIPAP38571 399 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 SPCS2Q15005 226 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 ZNF528Q3MIS6 628 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 KIRREL2Q6UWL6 708 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 HSDL2Q6YN16 418 aa17.43■□□□□ 0.38
USP39-202ENST00000409025 BPHLQ86WA6 291 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms