RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 APOFQ13790 326 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 MAD2L1BPQ15013 274 aaPredicted RBP9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 TMEM44Q2T9K0 475 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 MEDAGQ5VYS4 303 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 SLX4IPQ5VYV7 408 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 ANKRD34AQ69YU3 496 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 FAAH2Q6GMR7 532 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 LCN10Q6JVE6 187 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 TMEM81Q6P7N7 255 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 CASP12Q6UXS9 341 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 SHISA6Q6ZSJ9 500 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 NDUFAF7Q7L592 441 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 P3H2Q8IVL5 708 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 GALNT6Q8NCL4 622 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 OR8J1Q8NGP2 316 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 PHOSPHO1Q8TCT1 267 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 GTPBP3Q969Y2 492 aaKnown RBP9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 ARSGQ96EG1 525 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 ADOQ96SZ5 270 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 PRSS27Q9BQR3 290 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 ZNF426Q9BUY5 554 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 TBL1XR1Q9BZK7 514 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 SLC25A19Q9HC21 320 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 PARD6AQ9NPB6 346 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 MED17Q9NVC6 651 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 IMPAD1Q9NX62 359 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 TOR4AQ9NXH8 423 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 IL20Q9NYY1 176 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 MYOTQ9UBF9 498 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 PISDQ9UG56 409 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 SLC7A7Q9UM01 511 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 GPR179Q6PRD1 2367 aa9.48□□□□□ -0.89
SNORD88C-201ENST00000408061 LAMA1P25391 3075 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 A0A087WUJ7 227 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 NPIPA5A0A0B4J1W7 369 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 TRBV11-1A0A0K0K1C0 115 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 CENPVL1A0A0U1RR11 272 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 A0A1B0GWA3 101 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 SNTNA6NMZ2 147 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 NPIPA7E9PJI5 369 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 H3BN98 237 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 KLF4O43474 513 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 FRS3O43559 492 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 NDUFB5O43674 189 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 BCAS1O75363 584 aaPredicted RBP9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 LYPD3O95274 346 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 CLIC3O95833 236 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 ANGPTL1O95841 491 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 HMGN1P05114 100 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 UMODP07911 640 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 GKN3PP0CG01 181 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 NPIPA8P0DM63 369 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 PRG2P13727 222 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 ITIH1P19827 911 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 TCN2P20062 427 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 HTR2AP28223 471 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 ETV5P41161 510 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 HTR3AP46098 478 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 SLC9A3P48764 834 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 GTF2A1P52655 376 aaPredicted RBP9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 CDK5Q00535 292 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 SNTA1Q13424 505 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 PCOLCEQ15113 449 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 ALG10BQ5I7T1 473 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 HES3Q5TGS1 186 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 BROXQ5VW32 411 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 SLC27A4Q6P1M0 643 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 BORAQ6PGQ7 559 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 OPN5Q6U736 354 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 IGF2-ASQ6U949 168 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 C5orf46Q6UWT4 87 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 HMGN2P46Q86SG4 172 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 MRGPREQ86SM8 312 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 NKAIN4Q8IVV8 208 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 POGLUT1Q8NBL1 392 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 TEX47Q8TBZ9 253 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 RNF138Q8WVD3 245 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 EFHD2Q96C19 240 aaPredicted RBP9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 TUBA1CQ9BQE3 449 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 TMEM43Q9BTV4 400 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 DUSP21Q9H596 190 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 CLN6Q9NWW5 311 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 ZNF223Q9UK11 482 aaPredicted RBP9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 TCFL5Q9UL49 500 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 ICAM5Q9UMF0 924 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 BAIAP2Q9UQB8 552 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 YARS2Q9Y2Z4 477 aaKnown RBP9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 PCDHGB1Q9Y5G3 927 aa9.47□□□□□ -0.89
SNORD88C-201ENST00000408061 KIF26BQ2KJY2 2108 aa9.46□□□□□ -0.89
SNORD88C-201ENST00000408061 KNTC1P50748 2209 aa9.46□□□□□ -0.89
SNORD88C-201ENST00000408061 NSG1A0A0A6YYJ2 146 aa9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 SLC1A7O00341 560 aa9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 TP53I11O14683 189 aa9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 CDC40O60508 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.97e-59■■□□□ 13.2
SNORD88C-201ENST00000408061 HPP00738 406 aa9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 THY1P04216 161 aa9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 TFAP2AP05549 437 aa9.46□□□□□ -0.9
SNORD88C-201ENST00000408061 SMIM18P0DKX4 95 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms