RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 BORCS5Q969J3 196 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 DCSTAMPQ9H295 470 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 ATXN7L1Q9ULK2 861 aaPredicted RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 PCDHGA3Q9Y5H0 932 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 ARID1BQ8NFD5 2236 aaPredicted RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 LOC100506127A0A0U1RQW1 187 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 A0A1B0GVG6 124 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 ADAM11O75078 769 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 CSO75390 466 aaKnown RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 TDGF1P13385 188 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 BMP7P18075 431 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 TGFBR1P36897 503 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 RBM34P42696 430 aaKnown RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 MTNR1AP48039 350 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 CTBP2P56545 445 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 TUBA1BP68363 451 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 C1DQ13901 141 aaKnown RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 ELAVL1Q15717 326 aaKnown RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 HLA-BQ31612 363 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 VWA2Q5GFL6 755 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 ALG10BQ5I7T1 473 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 RPL13AP3Q6NVV1 102 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 GUSBP11Q6P575 273 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 TUBA1AQ71U36 451 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 SLC2A12Q8TD20 617 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 SAP25Q8TEE9 199 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 EFHD2Q96C19 240 aaPredicted RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 HOXD1Q9GZZ0 328 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 OR51E2Q9H255 320 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 FGF20Q9NP95 211 aaPredicted RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 FSCN3Q9NQT6 498 aa22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 CHCHD3Q9NX63 227 aaKnown RBP22.73■■□□□ 1.23
DNMT3A-206ENST00000406659 CACNA1EQ15878 2313 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 EFCAB7A8K855 629 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 SAGP10523 405 aaPredicted RBP22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 MYL12AP19105 171 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 FUT1P19526 365 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 GRK5P34947 590 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 TIMM50Q3ZCQ8 353 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 PLK5Q496M5 336 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 C3orf38Q5JPI3 329 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 USP43Q70EL4 1123 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 PRSS58Q8IYP2 241 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 OPALINQ96PE5 141 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 H2AFY2Q9P0M6 372 aaPredicted RBP22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 RP1P56715 2156 aa22.72■■□□□ 1.23
DNMT3A-206ENST00000406659 TCRBV16S1A1N1A0A5B0 115 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ARHGAP33O14559 1287 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SIGLEC6O43699 453 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 PRKNO60260 465 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SCG5P05408 212 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZGLP1P0C6A0 271 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 CDH11P55287 796 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 CSTF1Q05048 431 aaKnown RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 NSDHLQ15738 373 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ULK3Q6PHR2 472 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF440Q8IYI8 595 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZSCAN1Q8NBB4 408 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 EDAQ92838 391 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 PHOX2BQ99453 314 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 CHCHD6Q9BRQ6 235 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SLC7A5P2Q9GIP4 190 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZBTB20Q9HC78 741 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 MKKSQ9NPJ1 570 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 MEPEQ9NQ76 525 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 OSGIN1Q9UJX0 560 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SLC35A3Q9Y2D2 325 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SYNDIG1LA6NDD5 238 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 IL33O95760 270 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 DDAH2O95865 285 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SQSTM1Q13501 440 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 NDUFAF6Q330K2 333 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 KLHL26Q53HC5 615 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 PERM1Q5SV97 790 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 AADACL4Q5VUY2 407 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF574Q6ZN55 896 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 TMPRSS9Q7Z410 1059 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 LSRQ86X29 649 aaPredicted RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF527Q8NB42 609 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 KBTBD8Q8NFY9 601 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 OR13C2Q8NGS9 318 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ZNF721Q8TF20 911 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 VMP1Q96GC9 406 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 ART5Q96L15 291 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 LMF1Q96S06 567 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 NXF5Q9H1B4 397 aaKnown RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 OCEL1Q9H607 264 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 UBQLN4Q9NRR5 601 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 MRTO4Q9UKD2 239 aaKnown RBP22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 SRPK3Q9UPE1 567 aa22.71■■□□□ 1.23
DNMT3A-206ENST00000406659 CFIP05156 583 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 HPGDP15428 266 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 ETV5P41161 510 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 ETV1P50549 477 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 GAS1P54826 345 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 CCL7P80098 99 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 C19orf48Q6RUI8 117 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 SMARCD3Q6STE5 483 aa22.7■■□□□ 1.22
DNMT3A-206ENST00000406659 PAQR6Q6TCH4 344 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms