RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 SOD1P00441 154 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 HOXC12P31275 282 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CTSOP43234 321 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 BTG1P62324 171 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ALG11Q2TAA5 492 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 DNAJB7Q7Z6W7 309 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ARL14EPQ8N8R7 260 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR14A16Q8NHC5 309 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 FIBINQ8TAL6 211 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 WFIKKN2Q8TEU8 576 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 ARMC5Q96C12 935 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 TMEM169Q96HH4 297 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 MRPL37Q9BZE1 423 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 OPA3Q9H6K4 179 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 NT5DC2Q9H857 520 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 WBP1LQ9NX94 342 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 PPP4R1LQ9P1A2 415 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CHTOPQ9Y3Y2 248 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 OIP5O43482 229 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLC19A2O60779 497 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 MMP11P24347 488 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 AVPR1BP47901 424 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 TBPL1P62380 186 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CNTN1Q12860 1018 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 PIN1Q13526 163 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLC36A4Q6YBV0 504 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 PCSK9Q8NBP7 692 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR4D11Q8NGI4 311 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 FGF11Q92914 225 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 OTULINQ96BN8 352 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CHFRQ96EP1 664 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 FAM83CQ9BQN1 747 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 C2orf88Q9BSF0 95 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 FNDC11Q9BVV2 318 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 RSPO3Q9BXY4 272 aaPredicted RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 CCDC88CQ9P219 2028 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 LSM7Q9UK45 103 aaKnown RBP15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 BACE2Q9Y5Z0 518 aa15.12■□□□□ 0.01
COL4A3BP-204ENST00000405807 D6RAR5 112 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 HLA-DPB1P04440 258 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 HOXC4P09017 264 aaPredicted RBP15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 GAAP10253 952 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 DNASE1P24855 282 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 MTNR1AP48039 350 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 RBP2P50120 134 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 MPPE1Q53F39 396 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 C22orf39Q6P5X5 142 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 MEIOBQ8N635 442 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 LILRA3Q8N6C8 439 aaPredicted RBP15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 TEX19Q8NA77 164 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF480Q8WV37 535 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR5P2Q8WZ92 322 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 RAB8BQ92930 207 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLC28A3Q9HAS3 691 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 FBXW2Q9UKT8 454 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 A4GNTQ9UNA3 340 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 SLC5A10A0PJK1 596 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 BTBD17A6NE02 478 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 TOX3O15405 576 aaPredicted RBP15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 TGM5O43548 720 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 EPHX1P07099 455 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 PPM1AP35813 382 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 MANFP55145 182 aaKnown RBP15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 CLN3Q13286 438 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR4K5Q8NGD3 323 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR9A2Q8NGT5 310 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF461Q8TAF7 563 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 STK35Q8TDR2 534 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 ERMAPQ96PL5 475 aaPredicted RBP15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 DHCR7Q9UBM7 475 aaKnown RBP15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 YIPF1Q9Y548 306 aa15.11■□□□□ 0.01
COL4A3BP-204ENST00000405807 OR6C68A6NDL8 312 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 ANHXE9PGG2 379 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 LZTS3O60299 673 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 EGFP01133 1207 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 POU3F2P20265 443 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 CCL23P55773 120 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 CCDC85BQ15834 202 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 MMP21Q8N119 569 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 SPACA1Q9HBV2 294 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 FAM212BQ9NTI7 297 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZNF879B4DU55 563 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 GSTM3P21266 225 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 CTBP2P56545 445 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 VSX2P58304 361 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 Q6ZVL8 140 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 C6orf120Q7Z4R8 191 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 HSD11B1LQ7Z5J1 315 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 TMEM150AQ86TG1 271 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 MARCH9Q86YJ5 346 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZFP41Q8N8Y5 198 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 NEIL3Q8TAT5 605 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 ZDHHC1Q8WTX9 485 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 SENP5Q96HI0 755 aaPredicted RBP15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 WFDC6Q9BQY6 131 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 HDHD2Q9H0R4 259 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 GAB2Q9UQC2 676 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 SH2B3Q9UQQ2 575 aa15.1■□□□□ 0.01
COL4A3BP-204ENST00000405807 NCR1O76036 304 aa15.09■□□□□ 0.01
COL4A3BP-204ENST00000405807 LIMS3P0CW19 117 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms