RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 A8MU76 341 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 H7C423 109 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 CHADO15335 359 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 MBTPS2O43462 519 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 RAD51CO43502 376 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 IDH3BO43837 385 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 MFSD11O43934 449 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 NXPH4O95158 308 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 EZRP15311 586 aaKnown RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 PSMC3P17980 439 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 AOC1P19801 751 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 FCARP24071 287 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 EDNRAP25101 427 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR1E1P30953 314 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GPR183P32249 361 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 IFNAR2P48551 515 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 PLK1P53350 603 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 RPS24P62847 133 aaKnown RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DYNLT1P63172 113 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DR1Q01658 176 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GBE1Q04446 702 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC3A1Q07837 685 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 C2orf54Q08AI8 447 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF177Q13360 481 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DMC1Q14565 340 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 RFTN1Q14699 578 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 FASTKD3Q14CZ7 662 aaKnown RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 PDGFRLQ15198 375 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 FCN2Q15485 313 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 SGCBQ16585 318 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 AARDQ4LEZ3 155 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 IFI44LQ53G44 452 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF776Q68DI1 518 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DUPD1Q68J44 220 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 KCTD11Q693B1 232 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 C8orf74Q6P047 294 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 RFWD3Q6PCD5 774 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF613Q6PF04 617 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GDPGP1Q6ZNW5 385 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GET4Q7L5D6 327 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMEM126BQ8IUX1 230 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 LAX1Q8IWV1 398 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DEFB123Q8N688 67 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ALLCQ8N6M5 410 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 NPWQ8N729 165 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 Q8NBF4 154 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR9Q2Q8NGE9 314 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 TFB1MQ8WVM0 346 aaKnown RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 HTR3CQ8WXA8 447 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ING5Q8WYH8 240 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GGHQ92820 318 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 BCL2L2Q92843 193 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRICKLE1Q96MT3 831 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GUCD1Q96NT3 240 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 QKIQ96PU8 341 aaKnown RBP eCLIP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ERP44Q9BS26 406 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 RAB17Q9H0T7 212 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 TRPV5Q9NQA5 729 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 FAM212BQ9NTI7 297 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 DUS2Q9NX74 493 aaKnown RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 KLK11Q9UBX7 282 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 PILRAQ9UKJ1 303 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 FBXW2Q9UKT8 454 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 SH3GLB1Q9Y371 365 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 HEY1Q9Y5J3 304 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 SNX10Q9Y5X0 201 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 LRRK1Q38SD2 2015 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 TRPM6Q9BX84 2022 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 NUMA1Q14980 2115 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 MUC22E2RYF6 1773 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRUNE2Q8WUY3 3088 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SCN8AQ9UQD0 1980 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 EYSQ5T1H1 3165 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 DOCK9Q9BZ29 2069 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 LOC105371242A0A075B767 164 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 IGHV3-20A0A0C4DH32 117 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 ERI2A8K979 691 aaKnown RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 H7C0C1 242 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SGK1O00141 431 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SOCS3O14543 225 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 KDELR3O43731 214 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CACNG3O60359 315 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TBL1XO60907 577 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CLN5O75503 358 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SORBS2O94875 1100 aaKnown RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 KRT14P02533 472 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 RHOCP08134 193 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 NUDT17P0C025 328 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 FOSL2P15408 326 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 UGT1A4P22310 534 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 IVDP26440 423 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 HSPA9P38646 679 aaKnown RBP4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 MAGEA6P43360 314 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 ATP5OP48047 213 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 SMSP52788 366 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMEM50BP56557 158 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CDK16Q00536 496 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 GNA12Q03113 381 aa4.11□□□□□ -1.75
HMGB3P19-201ENST00000403971 CAV1Q03135 178 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms