RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 ZSWIM7Q19AV6 140 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 NIPAL3Q6P499 406 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 METTL27Q8N6F8 245 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-205ENST00000403433 ZNF485Q8NCK3 441 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 OR52N1Q8NH53 320 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 NACC2Q96BF6 587 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 ZNF578Q96N58 590 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-205ENST00000403433 ZNF285Q96NJ3 590 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 PTCHD1Q96NR3 888 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 SECISBP2Q96T21 854 aaKnown RBP16.53■□□□□ 0.24
CHTOP-205ENST00000403433 NEURL2Q9BR09 285 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 G6PC3Q9BUM1 346 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 CCDC32Q9BV29 185 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 IFT27Q9BW83 186 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 JAM3Q9BX67 310 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 MIR1-1HGQ9H1L0 117 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 TPK1Q9H3S4 243 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 UBE2ZQ9H832 354 aaPredicted RBP16.53■□□□□ 0.24
CHTOP-205ENST00000403433 CPNE5Q9HCH3 593 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 FLRT3Q9NZU0 649 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 GSTK1Q9Y2Q3 226 aa16.53■□□□□ 0.24
CHTOP-205ENST00000403433 SF3B6Q9Y3B4 125 aaKnown RBP16.53■□□□□ 0.24
CHTOP-205ENST00000403433 SYNDIG1LA6NDD5 238 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 TLCD2A6NGC4 264 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 MAOAP21397 527 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 MAOBP27338 520 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 TNFSF8P32971 234 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 RBM34P42696 430 aaKnown RBP16.52■□□□□ 0.23
CHTOP-205ENST00000403433 CD97P48960 835 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 PGDP52209 483 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 PSMD4P55036 377 aaKnown RBP16.52■□□□□ 0.23
CHTOP-205ENST00000403433 GFERP55789 205 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 RACK1P63244 317 aaKnown RBP16.52■□□□□ 0.23
CHTOP-205ENST00000403433 ZNF791Q3KP31 576 aaPredicted RBP16.52■□□□□ 0.23
CHTOP-205ENST00000403433 SLC35F1Q5T1Q4 408 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 NPSR1Q6W5P4 371 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 ZNF550Q7Z398 422 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 LSRQ86X29 649 aaPredicted RBP16.52■□□□□ 0.23
CHTOP-205ENST00000403433 ZFP41Q8N8Y5 198 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 OR51G2Q8NGK0 314 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 MED18Q9BUE0 208 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 PDE7BQ9NP56 450 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 ERVK-19Q9WJR5 959 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 SIGLEC7Q9Y286 467 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 DTX4Q9Y2E6 619 aa16.52■□□□□ 0.23
CHTOP-205ENST00000403433 CACNA1IQ9P0X4 2223 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 AQP9O43315 295 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 PTTG1O95997 202 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 GABRA4P48169 554 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 FNTBP49356 437 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 DEFA1P59665 94 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 DEFA3P59666 94 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 HNRNPA0Q13151 305 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 KRR1Q13601 381 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 ZNF141Q15928 474 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 TBC1D25Q3MII6 688 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 ALG10BQ5I7T1 473 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 TCTE1Q5JU00 501 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 ARMC4Q5T2S8 1044 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 MEPCEQ7L2J0 689 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 SIRT6Q8N6T7 355 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 CADM4Q8NFZ8 388 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 SPRYD4Q8WW59 207 aaPredicted RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 SLC35B4Q969S0 331 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 SPACA7Q96KW9 195 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 TM9SF2Q99805 663 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 PCED1AQ9H1Q7 454 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 MEPEQ9NQ76 525 aaPredicted RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 MRPS17Q9Y2R5 130 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 CMAHPQ9Y471 501 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 OR10H1Q9Y4A9 318 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 TRAV27A0A087WT01 109 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 DLGAP3O95886 979 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 IFNA16P05015 189 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 ACAA2P42765 397 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 GPR3P46089 330 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 SLC9A3P48764 834 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 HSD17B7P56937 341 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 PSPHP78330 225 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 FABP5Q01469 135 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 ACSM1Q08AH1 577 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 FGFBP1Q14512 234 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 NNATQ16517 81 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 DEFB133Q30KQ1 61 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 PRPF38BQ5VTL8 546 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 TMPRSS11AQ6ZMR5 421 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 GATAD2AQ86YP4 633 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 RCBTB1Q8NDN9 531 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 OR51Q1Q8NH59 317 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 HTRA1Q92743 480 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 WDFY2Q96P53 400 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 PELOQ9BRX2 385 aaKnown RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 ENKD1Q9H0I2 346 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 MED20Q9H944 212 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 CMC2Q9NRP2 79 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 RPS6KB2Q9UBS0 482 aa16.51■□□□□ 0.23
CHTOP-205ENST00000403433 CAB39Q9Y376 341 aaPredicted RBP16.51■□□□□ 0.23
CHTOP-205ENST00000403433 IGHV5-51A0A0C4DH38 117 aa16.5■□□□□ 0.23
CHTOP-205ENST00000403433 CCDC85CA6NKD9 419 aa16.5■□□□□ 0.23
CHTOP-205ENST00000403433 RIIAD1A6NNX1 92 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms