RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 INPP5EQ9NRR6 644 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 SLC7A7Q9UM01 511 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 ING4Q9UNL4 249 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 RASD1Q9Y272 281 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 PRR23AA6NEV1 266 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 ICMTO60725 284 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 IL20RBQ6UXL0 311 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 GPR135Q8IZ08 494 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 OR5W2Q8NH69 310 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 RANBP3Q9H6Z4 567 aaPredicted RBP18.41■□□□□ 0.54
CCDC47-202ENST00000403162 FBXL21Q9UKT6 434 aa18.41■□□□□ 0.54
CCDC47-202ENST00000403162 MDC1Q14676 2089 aaKnown RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 A0A1W2PQ72 361 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 DUXAA6NLW8 204 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 C1QTNF3-AMACRE9PGA6 284 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 PLPP2O43688 288 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 HOXB3P14651 431 aaPredicted RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 STOMP27105 288 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 MRPS21P82921 87 aaKnown RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 NTRK2Q16620 822 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 PYHIN1Q6K0P9 492 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 AMIGO1Q86WK6 493 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 CACUL1Q86Y37 369 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 SRFBP1Q8NEF9 429 aaKnown RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 ADAMTS15Q8TE58 950 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 ART5Q96L15 291 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 SARGQ9BW04 601 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 OR52D1Q9H346 318 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 MTHFD2LQ9H903 347 aaPredicted RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 PTTG3PQ9NZH4 202 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 ZNF780BQ9Y6R6 833 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 A0A0G2JK05 382 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 DAPL1A0PJW8 107 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 UNC119BA6NIH7 251 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 LEUTXA8MZ59 168 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 GPR89AB7ZAQ6 455 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 EEF1E1O43324 174 aaKnown RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 GPR89BP0CG08 455 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 HOXB2P14652 356 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 CCINQ13939 588 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 FAM20CQ8IXL6 584 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 RPLP0P6Q8NHW5 317 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 KAT2AQ92830 837 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 KISS1RQ969F8 398 aaPredicted RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 PHF21AQ96BD5 680 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 GABRG3Q99928 467 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 DPAGT1Q9H3H5 408 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 ZFP64Q9NPA5 681 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 ELF5Q9UKW6 265 aaPredicted RBP18.4■□□□□ 0.54
CCDC47-202ENST00000403162 NUBP2Q9Y5Y2 271 aa18.4■□□□□ 0.54
CCDC47-202ENST00000403162 C19orf67A6NJJ6 358 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 BHLHE40O14503 412 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 SOX30O94993 753 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 MT-ND5P03915 603 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 FXYD6P3P58550 94 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 IKZF1Q13422 519 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 LTB4RQ15722 352 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 ZNF836Q6ZNA1 936 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 GPALPP1Q8IXQ4 340 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 OR52L1Q8NGH7 329 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 FANK1Q8TC84 345 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 ABHD1Q96SE0 405 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 TEX101Q9BY14 249 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 MED20Q9H944 212 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 ATP13A2Q9NQ11 1180 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 NTMQ9P121 344 aa18.39■□□□□ 0.53
CCDC47-202ENST00000403162 ZC3H12DA2A288 527 aaKnown RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 IGLON5A6NGN9 336 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 PRICKLE3O43900 615 aaPredicted RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 AGR2O95994 175 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 ZNF136P52737 540 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 PER3P56645 1201 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 TAS2R43P59537 309 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 CCNJQ5T5M9 372 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 CD276Q5ZPR3 534 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 MFSD12Q6NUT3 480 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 PXKQ7Z7A4 578 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 OR11H7Q8NGC8 314 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 ZNF431Q8TF32 576 aaPredicted RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 MARVELD3Q96A59 401 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 MS4A4EQ96PG1 132 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 TBX5Q99593 518 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 PRSS27Q9BQR3 290 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 NDC1Q9BTX1 674 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 RSPH9Q9H1X1 276 aaPredicted RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 CACYBPQ9HB71 228 aaKnown RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 NUDT15Q9NV35 164 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 LYARQ9NX58 379 aaKnown RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 ZNF223Q9UK11 482 aaPredicted RBP18.38■□□□□ 0.53
CCDC47-202ENST00000403162 SC5DO75845 299 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 TBXA2RP21731 343 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 UQCRC1P31930 480 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 OR10A3P58181 314 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 SLC36A2Q495M3 483 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 EIPR1Q53HC9 387 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 ARL9Q6T311 187 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 NRROSQ86YC3 692 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 LNX2Q8N448 690 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 SLC16A11Q8NCK7 471 aa18.38■□□□□ 0.53
CCDC47-202ENST00000403162 OR8H1Q8NGG4 311 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms