RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 NLGN4YQ8NFZ3 816 aaPredicted RBP13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC22A18Q96BI1 424 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC6A16Q9GZN6 736 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 SYT4Q9H2B2 425 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF225Q9UK10 706 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 HEBP2Q9Y5Z4 205 aa13.69□□□□□ -0.22
RPRD1A-202ENST00000399022 NAP1L6A6NFF2 107 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 LEUTXA8MZ59 168 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 RFXAPO00287 272 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 TSPAN12O95859 305 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 GRPRP30550 384 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 EPHA5P54756 1037 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 TMC8Q8IU68 726 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ARL11Q969Q4 196 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 DTD2Q96FN9 168 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 NDUFB11Q9NX14 153 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 CLDND1Q9NY35 253 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC9B1P1A6NJY1 282 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 UGDHO60701 494 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 CYB5AP00167 134 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ARAFP10398 606 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 GRK6P43250 576 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 EVX1P49640 407 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 RAB2AP61019 212 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 TEKQ02763 1124 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 FCRLBQ6BAA4 426 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 NRSN1Q8IZ57 195 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 SUN3Q8TAQ9 357 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ELP4Q96EB1 424 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 CNTNAP3BQ96NU0 1288 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 GPER1Q99527 375 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC25A18Q9H1K4 315 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ASCC3Q8N3C0 2202 aaKnown RBP13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 TRDV1A0A1B0GX56 115 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 UNC119BA6NIH7 251 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 B4DGG1 531 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 CLDN4O14493 209 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 GABRB1P18505 474 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 FXNQ16595 210 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF542PQ5EBM4 170 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 SAMD14Q8IZD0 417 aaPredicted RBP13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 OR56A1Q8NGH5 318 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 WDR20Q8TBZ3 569 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 RGCCQ9H4X1 137 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ZNF768Q9H5H4 540 aaKnown RBP13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 MKKSQ9NPJ1 570 aaPredicted RBP13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 ACER3Q9NUN7 267 aa13.68□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC25A12O75746 678 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 C1orf105O95561 183 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 PRR35P0CG20 571 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 ACTC1P68032 377 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 ACTA1P68133 377 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 CST6Q15828 149 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 HNRNPA1L2Q32P51 320 aaKnown RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 ITPRIPL2Q3MIP1 535 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 PRRT3Q5FWE3 981 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 THEM6Q8WUY1 208 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 TCTEX1D2Q8WW35 142 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 POLDIP3Q9BY77 421 aaKnown RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 MEIS3P1A6NDR6 274 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 B4GALT2O60909 372 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 AKT2P31751 481 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 FLI1Q01543 452 aaPredicted RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 SFXN4Q6P4A7 337 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 DPPA4Q7L190 304 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 OR2L2Q8NH16 312 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 TRAV18A0A075B6X5 111 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 LCMT2O60294 686 aaKnown RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 MAS1P04201 325 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 TPOP07202 933 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC6A6P31641 620 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 OR3A2P47893 321 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 C19orf57Q0VDD7 668 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 RUNX3Q13761 415 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 HACD4Q5VWC8 232 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 UNC5DQ6UXZ4 953 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 NUP43Q8NFH3 380 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 OR5T2Q8NGG2 359 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 BRIX1Q8TDN6 353 aaKnown RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 ATG5Q9H1Y0 275 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 BRF2Q9HAW0 419 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 NIT2Q9NQR4 276 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 TRABD2BA6NFA1 517 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 CDC123O75794 336 aaPredicted RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 CA3P07451 260 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 SYPP08247 313 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 SIM1P81133 766 aaPredicted RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 SLC14A1Q13336 389 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 FER1L6Q2WGJ9 1857 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 RAB11FIP2Q7L804 512 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 NLRC3Q7RTR2 1065 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 PRSS45Q7RTY3 260 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 MSRB3Q8IXL7 192 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 KLHDC8AQ8IYD2 350 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 ANKRD53Q8N9V6 530 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 NR4A3Q92570 626 aa13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 TREX2Q9BQ50 279 aaPredicted RBP13.67□□□□□ -0.22
RPRD1A-202ENST00000399022 KLHL42Q9P2K6 505 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms