RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 CD163Q86VB7 1156 aa22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 FAM71CQ8NEG0 241 aa22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 RSPO3Q9BXY4 272 aaPredicted RBP22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 LAT2Q9GZY6 243 aa22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 CACYBPQ9HB71 228 aaKnown RBP22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 PNPLA3Q9NST1 481 aa22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 MRPS18CQ9Y3D5 142 aaKnown RBP22.99■■□□□ 1.27
TMEM55B-202ENST00000398020 PABPC4LP0CB38 370 aaKnown RBP22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 RYKP34925 604 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 GFRA1P56159 465 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 B3GALT5-AS1P59052 145 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 PSME3P61289 254 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 KRT73Q86Y46 540 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 CLIP4Q8N3C7 705 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 TOR1AIP2Q8NFQ8 470 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 OR5W2Q8NH69 310 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 FAM57AQ8TBR7 257 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 GPR119Q8TDV5 335 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 UGT2B28Q9BY64 529 aa22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 DNAJB12Q9NXW2 375 aaKnown RBP22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 GPC6Q9Y625 555 aaPredicted RBP22.98■■□□□ 1.27
TMEM55B-202ENST00000398020 OR14I1A6ND48 311 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 NME4O00746 187 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 ADAM11O75078 769 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 GCM2O75603 506 aaPredicted RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 ESRRAP11474 423 aaPredicted RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 ETS2P15036 469 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 PCGF2P35227 344 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 STARP49675 285 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 EEF1A1P68104 462 aaKnown RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 CRYZQ08257 329 aaKnown RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 LARS2Q15031 903 aaKnown RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 PLPPR5Q32ZL2 321 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 ABTB1Q969K4 478 aaPredicted RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 SARAFQ96BY9 339 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 REXO5Q96IC2 774 aaKnown RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 TIMP4Q99727 224 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 SPATA9Q9BWV2 254 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 ZNF232Q9UNY5 417 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 IFT52Q9Y366 437 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 CHST2Q9Y4C5 530 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 OR2M5A3KFT3 312 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 CDHR4A6H8M9 788 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 THBS1P07996 1170 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 SUMO3P55854 103 aaPredicted RBP22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 SLC25A3Q00325 362 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 CBFBQ13951 182 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 GXYLT1Q4G148 440 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 EMC4Q5J8M3 183 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 VASNQ6EMK4 673 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 DOLPP1Q86YN1 238 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 CMIPQ8IY22 773 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 ZNF607Q96SK3 696 aa22.97■■□□□ 1.27
TMEM55B-202ENST00000398020 FAM47E-STBD1D6RA91 191 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 PRRG2O14669 202 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 OPN1SWP03999 348 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 STSP08842 583 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 LINGO3P0C6S8 592 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 GCKP35557 465 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 PCBP3P57721 371 aaKnown RBP22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 MXRA7P84157 204 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 LIPEQ05469 1076 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 NHSL2Q5HYW2 709 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 Q6ZPB1 254 aaPredicted RBP22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 OR2T12Q8NG77 320 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 NSL1Q96IY1 281 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 ALKBH4Q9NXW9 302 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 ZNF337Q9Y3M9 751 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 HIVEP3Q5T1R4 2406 aa22.96■■□□□ 1.27
TMEM55B-202ENST00000398020 A0A087WZY1 265 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 BCKDKO14874 412 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 FOXF1Q12946 379 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 QPRTQ15274 297 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 RNF220Q5VTB9 566 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 ZNF585AQ6P3V2 769 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 AAGABQ6PD74 315 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 TRPM8Q7Z2W7 1104 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 RNF145Q96MT1 663 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 PIGQQ9BRB3 760 aa22.95■■□□□ 1.26
TMEM55B-202ENST00000398020 FAM220BPB1ANY3 271 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 H3BML4 177 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 AP3D1O14617 1153 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 TPST1O60507 370 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 ACTL6AO96019 429 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 GKN3PP0CG01 181 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 DMTNQ08495 405 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 GLIPR1L2Q4G1C9 344 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 WLSQ5T9L3 541 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 COMTD1Q86VU5 262 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 ARMC8Q8IUR7 673 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 SMYD1Q8NB12 490 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 POC1BQ8TC44 478 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 ZBTB8AQ96BR9 441 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 SPATA5L1Q9BVQ7 753 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 EXOSC3Q9NQT5 275 aaKnown RBP22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 ADA2Q9NZK5 511 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 PACSIN3Q9UKS6 424 aa22.94■■□□□ 1.26
TMEM55B-202ENST00000398020 M0QX08 132 aa22.93■■□□□ 1.26
TMEM55B-202ENST00000398020 LRRTM2O43300 516 aa22.93■■□□□ 1.26
TMEM55B-202ENST00000398020 FRS3O43559 492 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms