RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 MICAQ29983 383 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 THOC3Q96J01 351 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 RP2O75695 350 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 AMY2AP04746 511 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 SDC1P18827 310 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 RAB3BP20337 219 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 NR4A2P43354 598 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 MAB21L1Q13394 359 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 OR8B8Q15620 311 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 MEX3BQ6ZN04 569 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 DDAH2O95865 285 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 HTR5AP47898 357 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ZNF423Q2M1K9 1284 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 GPR149Q86SP6 731 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 OR5L1Q8NGL2 311 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 PHF7Q9BWX1 381 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 NGBQ9NPG2 151 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 CCM2LQ9NUG4 571 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 SUSD5O60279 629 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 SLC16A7O60669 478 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ZNF81P51508 661 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 SEC61A1P61619 476 aaKnown RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 TMEM240Q5SV17 173 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 OR5M1Q8NGP8 315 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 OR5W2Q8NH69 310 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 MEPEQ9NQ76 525 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 FAM86C1Q9NVL1 165 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 GFRA2O00451 464 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 CRYGNQ8WXF5 182 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 TP63Q9H3D4 680 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 ARGFXA6NJG6 315 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 ZNF705EA8MWA4 302 aaPredicted RBP10.64□□□□□ -0.71
TTC28-201ENST00000397906 FOXC1Q12948 553 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 SLC22A6Q4U2R8 563 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 COG8Q96MW5 612 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 EMC9Q9Y3B6 208 aa10.64□□□□□ -0.71
TTC28-201ENST00000397906 TRAV18A0A075B6X5 111 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 PPP6CO00743 305 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 C3P1Q6ZMU1 363 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 BPHLQ86WA6 291 aaPredicted RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 ALG8Q9BVK2 526 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 CDCP1Q9H5V8 836 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ANKRD34BA5PLL1 514 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 IGHG1P01857 330 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ARHGAP19Q14CB8 494 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ENPP4Q9Y6X5 453 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 SLX4Q8IY92 1834 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 H7C1C5 153 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 LCN6P62502 163 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 FAM57BQ71RH2 274 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ZNF695Q8IW36 515 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 SDSLQ96GA7 329 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 GSTO2Q9H4Y5 243 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 SOCS7O14512 581 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 F11P03951 625 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ZNF182P17025 639 aaPredicted RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 RACK1P63244 317 aaKnown RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 TMEM205Q6UW68 189 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ARFGAP1Q8N6T3 406 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ADAMTS16Q8TE57 1224 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 TAF1P21675 1872 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 OSMP13725 252 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 WBP2NLQ6ICG8 309 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 CCDC74AQ96AQ1 378 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 TXNDC15Q96J42 360 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 DUSP13Q9UII6 198 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 KCND3Q9UK17 655 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 COL16A1Q07092 1604 aaPredicted RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 DLSTP36957 453 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 CNN3Q15417 329 aaKnown RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 UGT2A3Q6UWM9 527 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 SLC16A14Q7RTX9 510 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 FRMD1Q8N878 549 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 OR13J1Q8NGT2 312 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 PHIPQ8WWQ0 1821 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 FAM166BA8MTA8 275 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 FOXE1O00358 373 aaPredicted RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 CAPN3P20807 821 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 GSCP56915 257 aaPredicted RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 ALKAL1Q6UXT8 129 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 SPAG16Q8N0X2 631 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 SIRT6Q8N6T7 355 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 LTB4RQ15722 352 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 PIGGQ5H8A4 983 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 ZNF649Q9BS31 505 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 USP3Q9Y6I4 520 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 BORCS7-ASMTA0A0B4J1R7 106 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 J3KTA2 159 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 GOSR2O14653 212 aa10.63□□□□□ -0.71
TTC28-201ENST00000397906 LSM1O15116 133 aaKnown RBP10.63□□□□□ -0.71
TTC28-201ENST00000397906 A0A087WUU8 490 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 HMX3A6NHT5 357 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 SELENOWP63302 87 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MOGSQ13724 837 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 OR14A16Q8NHC5 309 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MGAT4CQ9UBM8 478 aa10.62□□□□□ -0.71
TTC28-201ENST00000397906 MTHFD2P13995 350 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms