RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 OR5W2Q8NH69 310 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 NFKBIDQ8NI38 313 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 PHF10Q8WUB8 498 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ZBTB8AQ96BR9 441 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 RCN3Q96D15 328 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 ARSGQ96EG1 525 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 NPAS1Q99742 590 aa19.17■□□□□ 0.66
TSPAN4-206ENST00000397408 PTPN13Q12923 2485 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 HEATR5AQ86XA9 2040 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 A0A0G2JPF8 293 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 HNRNPCL2B2RXH8 293 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 HNRNPCL3B7ZW38 293 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 H3BML4 177 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 HNRNPCL1O60812 293 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 LINGO3P0C6S8 592 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 HNRNPCL4P0DMR1 293 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 NID1P14543 1247 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 CPN1P15169 458 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 IL7RP16871 459 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 PLAURQ03405 335 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 SRYQ05066 204 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 FOXF1Q12946 379 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 ACSF3Q4G176 576 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 PRAMEF8Q5VWM4 474 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 PRAMEF7Q5VXH5 474 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 TREML1Q86YW5 311 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 GTPBP8Q8N3Z3 284 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 PCYOX1LQ8NBM8 494 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 RP9Q8TA86 221 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 BBS10Q8TAM1 723 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 GPR119Q8TDV5 335 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 LRRC58Q96CX6 371 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 RNF145Q96MT1 663 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 MYLK2Q9H1R3 596 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 ZNF337Q9Y3M9 751 aa19.16■□□□□ 0.66
TSPAN4-206ENST00000397408 USP9YO00507 2555 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 C7orf72A4D263 438 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 AHRRA9YTQ3 701 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 H0Y3Z8 333 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 LINC01387J3KSC0 135 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 COX4I1P13073 169 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 ZNF708P17019 499 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 PTGER4P35408 488 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 CLDN18P56856 261 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 CDK6Q00534 326 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 CBFBQ13951 182 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 TOMM34Q15785 309 aaPredicted RBP19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 CYP51A1Q16850 503 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 LIN52Q52LA3 116 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 MRPL2Q5T653 305 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 TMEM211Q6ICI0 200 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 RPTNQ6XPR3 784 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 PIGWQ7Z7B1 504 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 VRK2Q86Y07 508 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 CMIPQ8IY22 773 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 OR52P1PQ8NH57 321 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 SMPDL3BQ92485 455 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 TMEM38AQ9H6F2 299 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 CACYBPQ9HB71 228 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 BCL2L10Q9HD36 194 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 ARL2BPQ9Y2Y0 163 aa19.15■□□□□ 0.66
TSPAN4-206ENST00000397408 NCOA6Q14686 2063 aaPredicted RBP19.14■□□□□ 0.66
TSPAN4-206ENST00000397408 PHF3Q92576 2039 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 PGM3O95394 542 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 HOXD4P09016 255 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 PEPDP12955 493 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 NUP107P57740 925 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 SCARB2Q14108 478 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 QPRTQ15274 297 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 ADRM1Q16186 407 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 NANOGP8Q6NSW7 305 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 REEP3Q6NUK4 255 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 UBQLNLQ8IYU4 475 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 METTL25Q8N6Q8 603 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 POC1BQ8TC44 478 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 ITLN2Q8WWU7 325 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 CNOT9Q92600 299 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 TTYH2Q9BSA4 534 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 KAT8Q9H7Z6 458 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 NANOGQ9H9S0 305 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 GID8Q9NWU2 228 aa19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF443Q9Y2A4 671 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-206ENST00000397408 SEC14L5O43304 696 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 NPPAP01160 153 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 PRKCAP17252 672 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 SLC6A2P23975 617 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 EIF1P41567 113 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 SMSP52788 366 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 PMPCAQ10713 525 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 BCL2A1Q16548 175 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 RABL3Q5HYI8 236 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF836Q6ZNA1 936 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 MRGPRGQ86SM5 289 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 PTOV1Q86YD1 416 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 OR8J3Q8NGG0 315 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 OR10A6Q8NH74 314 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 ZNF524Q96C55 264 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 TRIB1Q96RU8 372 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 CCT8L2Q96SF2 557 aa19.13■□□□□ 0.65
TSPAN4-206ENST00000397408 TUBA1CQ9BQE3 449 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms