RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ZFP90Q8TF47 636 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 PRR14Q9BWN1 585 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 MYNNQ9NPC7 610 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 UBQLN4Q9NRR5 601 aa13.19□□□□□ -0.3
SEC13-206ENST00000397102 DYSFO75923 2080 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 IGHV3-15A0A0B4J1V0 119 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 NDUFS8O00217 210 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 SCDO00767 359 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 ZNF195O14628 629 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 TCF21O43680 179 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 KIAA0513O60268 411 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 SUPT7LO94864 414 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 APEHP13798 732 aaKnown RBP13.18□□□□□ -0.3
SEC13-206ENST00000397102 EDNRAP25101 427 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 CD40P25942 277 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 CFPP27918 469 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 PDLIM4P50479 330 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 RAC3P60763 192 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 CHRNB3Q05901 458 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 CD226Q15762 336 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 KLHL17Q6TDP4 642 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 ZDHHC24Q6UX98 284 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 C12orf54Q6X4T0 127 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 ZAR1Q86SH2 424 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 ZNF433Q8N7K0 673 aaPredicted RBP13.18□□□□□ -0.3
SEC13-206ENST00000397102 FBXO27Q8NI29 283 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
SEC13-206ENST00000397102 WBP11Q9Y2W2 641 aaKnown RBP13.18□□□□□ -0.3
SEC13-206ENST00000397102 GPC6Q9Y625 555 aaPredicted RBP13.18□□□□□ -0.3
SEC13-206ENST00000397102 PMF1-BGLAPU3KQ54 211 aa13.18□□□□□ -0.3
SEC13-206ENST00000397102 ARFGEF3Q5TH69 2177 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ESYT3A0FGR9 886 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 SERTM1A2A2V5 107 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 RAD51DO75771 328 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 LY6HO94772 140 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 KCNK2O95069 426 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ENO1P06733 434 aaKnown RBP13.17□□□□□ -0.3
SEC13-206ENST00000397102 ACP2P11117 423 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 NR4A2P43354 598 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ZNF83P51522 516 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ZNF117Q03924 483 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 RASGEF1BQ0VAM2 473 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 HSPB3Q12988 150 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 TRADDQ15628 312 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 UNC50Q53HI1 259 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ZNF678Q5SXM1 525 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
SEC13-206ENST00000397102 TMEM151AQ8N4L1 468 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 CEP70Q8NHQ1 597 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 ZNF300Q96RE9 604 aaPredicted RBP13.17□□□□□ -0.3
SEC13-206ENST00000397102 PIMREGQ9BSJ6 248 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 INPP5KQ9BT40 448 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 HEATR1Q9H583 2144 aaKnown RBP13.17□□□□□ -0.3
SEC13-206ENST00000397102 ACSS3Q9H6R3 686 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 STK38LQ9Y2H1 464 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 UTP11Q9Y3A2 253 aaKnown RBP13.17□□□□□ -0.3
SEC13-206ENST00000397102 SLC25A15Q9Y619 301 aa13.17□□□□□ -0.3
SEC13-206ENST00000397102 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 CCDC151A5D8V7 595 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 CYTIPO60759 359 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 HSPA4LO95757 839 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 NUDT14O95848 222 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 TGFAP01135 160 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 SLC7A1P30825 629 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 GPC1P35052 558 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 PHBP35232 272 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 SUMO3P55854 103 aaPredicted RBP13.16□□□□□ -0.3
SEC13-206ENST00000397102 GNG11P61952 73 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 SELENBP1Q13228 472 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 CR1LQ2VPA4 569 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 SPDYAQ5MJ70 313 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 IKBIPQ70UQ0 350 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
SEC13-206ENST00000397102 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 SLC16A11Q8NCK7 471 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 ATP6V1C2Q8NEY4 427 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 OR52N5Q8NH56 324 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 FBXO30Q8TB52 745 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 ZNF75CPQ92670 426 aaPredicted RBP13.16□□□□□ -0.3
SEC13-206ENST00000397102 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 C1orf159Q96HA4 380 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 MS4A4EQ96PG1 132 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 ADAM19Q9H013 955 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 RAB17Q9H0T7 212 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 TIMM22Q9Y584 194 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 ACTL7BQ9Y614 415 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 FKBP7Q9Y680 259 aa13.16□□□□□ -0.3
SEC13-206ENST00000397102 IGHV4-61A0A0C4DH41 118 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 A0A1W2PNR3 127 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 CIB4A0PJX0 185 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 C9JVG2 144 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 SMAD9O15198 467 aaKnown RBP13.15□□□□□ -0.3
SEC13-206ENST00000397102 INHBAP08476 426 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 ITGA2P17301 1181 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 APOBEC3AP31941 199 aaPredicted RBP13.15□□□□□ -0.3
SEC13-206ENST00000397102 SERPINB4P48594 390 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 P2RX1P51575 399 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 PRKAG1P54619 331 aa13.15□□□□□ -0.3
SEC13-206ENST00000397102 PKNOX1P55347 436 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms