RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 A0A1B0GWA3 101 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 TTC36A6NLP5 189 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 HCN1O60741 890 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 FUT1P19526 365 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 PTNP21246 168 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 GALP22466 123 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 FABP5Q01469 135 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 PLBD1Q6P4A8 553 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 SMARCD3Q6STE5 483 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 TMPRSS11AQ6ZMR5 421 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 FAM160A2Q8N612 972 aaPredicted RBP15.51■□□□□ 0.07
NUP50-202ENST00000396096 SIRT6Q8N6T7 355 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 ARIH2OSQ8N7S6 290 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 RLN3Q8WXF3 142 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 PEX11GQ96HA9 241 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 SECISBP2Q96T21 854 aaKnown RBP15.51■□□□□ 0.07
NUP50-202ENST00000396096 PHF7Q9BWX1 381 aaPredicted RBP15.51■□□□□ 0.07
NUP50-202ENST00000396096 CHRNA10Q9GZZ6 450 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 ASB6Q9NWX5 421 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 BAIAP2Q9UQB8 552 aa15.51■□□□□ 0.07
NUP50-202ENST00000396096 CAB39Q9Y376 341 aaPredicted RBP15.51■□□□□ 0.07
NUP50-202ENST00000396096 FAM86C2PA6NEL3 165 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 CLDN4O14493 209 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 ZNF749O43361 778 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 PRAMEF2O60811 474 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 SSTR4P31391 388 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 GALNSP34059 522 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 GPR3P46089 330 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 RNF144AP50876 292 aaPredicted RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 PSMD4P55036 377 aaKnown RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 FOXK2Q01167 660 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 FZD5Q13467 585 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 FGFBP1Q14512 234 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 PRPF38BQ5VTL8 546 aaKnown RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 ZNF322Q6U7Q0 402 aaPredicted RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 NPSR1Q6W5P4 371 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 LINC00114Q6XXX2 140 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 THSD4Q6ZMP0 1018 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 CMIPQ8IY22 773 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 OR13C2Q8NGS9 318 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 SETD6Q8TBK2 473 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 TM9SF2Q99805 663 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 RBCK1Q9BYM8 510 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 LMAN1LQ9HAT1 526 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 PLCL2Q9UPR0 1127 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 FAM183AA6NL82 134 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 METTL12A8MUP2 240 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 RGS5O15539 181 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 CLEC2LP0C7M8 214 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 CD38P28907 300 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 SDC2P34741 201 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 FUT7Q11130 342 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 HNRNPA0Q13151 305 aaKnown RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 GPR50Q13585 617 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 GAS6Q14393 721 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 ZC3H14Q6PJT7 736 aaKnown RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 ZNF550Q7Z398 422 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 LAX1Q8IWV1 398 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 OR4N2Q8NGD1 307 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 SPRYD4Q8WW59 207 aaPredicted RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 KISS1RQ969F8 398 aaPredicted RBP15.5■□□□□ 0.07
NUP50-202ENST00000396096 DGAT2Q96PD7 388 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 G6PC3Q9BUM1 346 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 KATNB1Q9BVA0 655 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 TPSD1Q9BZJ3 242 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 PCED1AQ9H1Q7 454 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 INPP5EQ9NRR6 644 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 TOR4AQ9NXH8 423 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 THADAQ6YHU6 1953 aa15.5■□□□□ 0.07
NUP50-202ENST00000396096 HRKO00198 91 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 AQP9O43315 295 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 ADAM11O75078 769 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 RFPL3O75679 317 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 HLA-DPB1P04440 258 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 PAICSP22234 425 aaKnown RBP15.49■□□□□ 0.07
NUP50-202ENST00000396096 ATP6V1E1P36543 226 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 HSD17B7P56937 341 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 MXD1Q05195 221 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 TDGQ13569 410 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 ZNF791Q3KP31 576 aaPredicted RBP15.49■□□□□ 0.07
NUP50-202ENST00000396096 ACBD7Q8N6N7 88 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 RCBTB1Q8NDN9 531 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 RNF217Q8TC41 542 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 GRHL3Q8TE85 626 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 AP3S1Q92572 193 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 HTRA1Q92743 480 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 IFT27Q9BW83 186 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 MIXL1Q9H2W2 232 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 TPK1Q9H3S4 243 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 Q9N2J8 555 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 POLHQ9Y253 713 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 SLC35A3Q9Y2D2 325 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 DTX4Q9Y2E6 619 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 SZT2Q5T011 3432 aa15.49■□□□□ 0.07
NUP50-202ENST00000396096 FITM1A5D6W6 292 aa15.48■□□□□ 0.07
NUP50-202ENST00000396096 CCDC182A6NF36 153 aa15.48■□□□□ 0.07
NUP50-202ENST00000396096 SLC22A31A6NKX4 558 aa15.48■□□□□ 0.07
NUP50-202ENST00000396096 DLGAP3O95886 979 aa15.48■□□□□ 0.07
NUP50-202ENST00000396096 SAGP10523 405 aaPredicted RBP15.48■□□□□ 0.07
NUP50-202ENST00000396096 SPNP16150 400 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms