RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 DUXAA6NLW8 204 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 GPR89AB7ZAQ6 455 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 FABP7O15540 132 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 EEF1E1O43324 174 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 REM1O75628 298 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 GPR89BP0CG08 455 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 PRG2P13727 222 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 NPR2P20594 1047 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 TSFMP43897 325 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 PITPNBP48739 271 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 EEF1A1P68104 462 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 SHC2P98077 582 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 E2F1Q01094 437 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 ITPRIPL2Q3MIP1 535 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 BCL2L15Q5TBC7 163 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 PRPF38BQ5VTL8 546 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 AGBL4Q5VU57 503 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 GHDCQ8N2G8 530 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 OR10H4Q8NGA5 316 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 PFN4Q8NHR9 129 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 ABHD1Q96SE0 405 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 KRCC1Q9NPI7 259 aaPredicted RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 C20orf141Q9NUB4 165 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 SIDT1Q9NXL6 827 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 CD207Q9UJ71 328 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 MID1O15344 667 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 F8A1P23610 371 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 HTR2AP28223 471 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 FGL2Q14314 439 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 ARHGAP11BQ3KRB8 267 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 KLHL12Q53G59 568 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 CCNJQ5T5M9 372 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 KCT2Q8NC54 265 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 ANGPTL6Q8NI99 470 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 TTC9Q92623 222 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 ATP13A2Q9NQ11 1180 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 LYARQ9NX58 379 aaKnown RBP17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 NTMQ9P121 344 aa17.02■□□□□ 0.32
PCDHA1-202ENST00000394633 RNGTTO60942 597 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 ACSL1P33121 698 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 SRP9P49458 86 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 DUSP5Q16690 384 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 CEP78Q5JTW2 689 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF425Q6IV72 752 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 OR52L1Q8NGH7 329 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 HSD17B8Q92506 261 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 PTP4A1Q93096 173 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 HS6ST2Q96MM7 605 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 TIMM29Q9BSF4 260 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 MED28Q9H204 178 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 ZMIZ1Q9ULJ6 1067 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 TRAV6A0A075B6T7 132 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 C7orf66A4D0T2 115 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 C2CD4DB7Z1M9 353 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 PLPP2O43688 288 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 NARSO43776 548 aaKnown RBP17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 SOX30O94993 753 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 PAK4O96013 591 aaPredicted RBP17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 TEAD1P28347 426 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC3A1Q07837 685 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 GPR68Q15743 365 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 MAPK14Q16539 360 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 NTRK2Q16620 822 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC25A35Q3KQZ1 300 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 THSD4Q6ZMP0 1018 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 CEACAM19Q7Z692 300 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 LNX2Q8N448 690 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 FAM109AQ8N4B1 249 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 BMPERQ8N8U9 685 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 OR11H7Q8NGC8 314 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 SCMH1Q96GD3 660 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 CD180Q99467 661 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 GHITMQ9H3K2 345 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 SERGEFQ9UGK8 458 aa17.01■□□□□ 0.31
PCDHA1-202ENST00000394633 TMEM265A0A087WTH1 108 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TBC1D3KA0A087X1G2 549 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TRAPPC13A5PLN9 417 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TBC1D3FA6NER0 549 aaPredicted RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC9B1P1A6NJY1 282 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 SCAMP1O15126 338 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 LYPD3O95274 346 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 MRPL3P09001 348 aaKnown RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 GKN3PP0CG01 181 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 IFI30P13284 250 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 SLC36A2Q495M3 483 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TBC1D3GQ6DHY5 549 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 MTSS1LQ765P7 747 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 LRRC25Q8N386 305 aaPredicted RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 C17orf47Q8NEP4 570 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 ABHD4Q8TB40 342 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 TRMT10AQ8TBZ6 339 aaKnown RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 PHF21AQ96BD5 680 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 SDF2Q99470 211 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 PIGUQ9H490 435 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 PHPT1Q9NRX4 125 aaPredicted RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 SLCO1C1Q9NYB5 712 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 ZNF624Q9P2J8 865 aaPredicted RBP17■□□□□ 0.31
PCDHA1-202ENST00000394633 PRR19A6NJB7 356 aa17■□□□□ 0.31
PCDHA1-202ENST00000394633 RFPL3O75679 317 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms