RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PCOLCEQ15113 449 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 TRIP6Q15654 476 aaKnown RBP16.06■□□□□ 0.16
MBD4-202ENST00000393278 SLX4IPQ5VYV7 408 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 TMEM236Q5W0B7 351 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 RHOXF1Q8NHV9 184 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 PHOSPHO1Q8TCT1 267 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 GRHL3Q8TE85 626 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 TMEM239Q8WW34 195 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 APH1BQ8WW43 257 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 FAM46AQ96IP4 442 aaKnown RBP16.06■□□□□ 0.16
MBD4-202ENST00000393278 KRCC1Q9NPI7 259 aaPredicted RBP16.06■□□□□ 0.16
MBD4-202ENST00000393278 CNIH4Q9P003 139 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 PADI1Q9ULC6 663 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 PCDHGA3Q9Y5H0 932 aa16.06■□□□□ 0.16
MBD4-202ENST00000393278 A0A1W2PNU3 283 aaPredicted RBP16.05■□□□□ 0.16
MBD4-202ENST00000393278 A0A1W2PQD3 144 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 OR6C70A6NIJ9 312 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 CD63P08962 238 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 GABRB1P18505 474 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 FMO3P31513 532 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 CDC42P60953 191 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 SKP2Q13309 424 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 HES3Q5TGS1 186 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 STPG1Q5TH74 334 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ZNF773Q6PK81 442 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 KIRREL2Q6UWL6 708 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 C6orf15Q6UXA7 325 aaPredicted RBP16.05■□□□□ 0.16
MBD4-202ENST00000393278 RASSF6Q6ZTQ3 369 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 MEX3DQ86XN8 651 aaKnown RBP16.05■□□□□ 0.16
MBD4-202ENST00000393278 POGLUT1Q8NBL1 392 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 BPIFB6Q8NFQ5 453 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 OR5L2Q8NGL0 311 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 IMPAD1Q9NX62 359 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ZNF226Q9NYT6 803 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 NPFFR2Q9Y5X5 522 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 OTOGLQ3ZCN5 2332 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 TMEM200CA6NKL6 621 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 C9orf172C9J069 976 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ALG1L2C9J202 215 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ZNF264O43296 627 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 OIP5O43482 229 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ZFAND5O76080 213 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 OR6B1O95007 311 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 EEF1B2P24534 225 aaKnown RBP16.05■□□□□ 0.16
MBD4-202ENST00000393278 TEKQ02763 1124 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ALG10BQ5I7T1 473 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 C12orf73Q69YU5 71 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 C16orf47Q6ZP98 133 aaPredicted RBP16.05■□□□□ 0.16
MBD4-202ENST00000393278 KIF18BQ86Y91 864 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 WDR36Q8NI36 951 aaKnown RBP16.05■□□□□ 0.16
MBD4-202ENST00000393278 RNF217Q8TC41 542 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 MPP4Q96JB8 637 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 HS6ST2Q96MM7 605 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 LRFN3Q9BTN0 628 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ZNF426Q9BUY5 554 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 SPRY4Q9C004 299 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 ZNF700Q9H0M5 742 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 FAM86C1Q9NVL1 165 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 HS3ST3B1Q9Y662 390 aa16.05■□□□□ 0.16
MBD4-202ENST00000393278 IGHV1-45A0A0A0MS14 117 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 GTPBP1O00178 669 aaKnown RBP16.04■□□□□ 0.16
MBD4-202ENST00000393278 XPNPEP2O43895 674 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 PPM1BO75688 479 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 CDK4P11802 303 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 FOLR3P41439 243 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 STAT5AP42229 794 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 RBM34P42696 430 aaKnown RBP16.04■□□□□ 0.16
MBD4-202ENST00000393278 GPR4P46093 362 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 ALDH3B2P48448 385 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 SMN1Q16637 294 aaKnown RBP16.04■□□□□ 0.16
MBD4-202ENST00000393278 ULK3Q6PHR2 472 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 TIPARPQ7Z3E1 657 aaKnown RBP16.04■□□□□ 0.16
MBD4-202ENST00000393278 SATL1Q86VE3 508 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 CCDC103Q8IW40 242 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 CADM2Q8N3J6 435 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 PFN4Q8NHR9 129 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 THAP3Q8WTV1 239 aaPredicted RBP16.04■□□□□ 0.16
MBD4-202ENST00000393278 RTN4RQ9BZR6 473 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 LAT2Q9GZY6 243 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 DSN1Q9H410 356 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 RPS6KB2Q9UBS0 482 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 CARD8Q9Y2G2 431 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 MED31Q9Y3C7 131 aa16.04■□□□□ 0.16
MBD4-202ENST00000393278 FADS1O60427 444 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 MPZL2O60487 215 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 ZNF354AO60765 605 aaPredicted RBP16.03■□□□□ 0.16
MBD4-202ENST00000393278 NADKO95544 446 aaPredicted RBP16.03■□□□□ 0.16
MBD4-202ENST00000393278 LINGO3P0C6S8 592 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 COX6A1P12074 109 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 PTNP21246 168 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 NBL1P41271 181 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 COPZ1P61923 177 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 CSNK2BP67870 215 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 CDK5Q00535 292 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 PRKCDQ05655 676 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 EFR3AQ14156 821 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 NADK2Q4G0N4 442 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 BROXQ5VW32 411 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 CBLN3Q6UW01 205 aa16.03■□□□□ 0.16
MBD4-202ENST00000393278 LINC00114Q6XXX2 140 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms