RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RFC2P35250 354 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 TMEM244Q5VVB8 128 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 AGTRAPQ6RW13 159 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 TIFABQ6ZNK6 161 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 MKXQ8IYA7 352 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 PSMF1Q92530 271 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 UCN3Q969E3 161 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 PRRC1Q96M27 445 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 FBXL4Q9UKA2 621 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 H3BSA7 217 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 KDELR2P33947 212 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 PKP2Q99959 881 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 DHRS9Q9BPW9 319 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 ZDHHC2Q9UIJ5 367 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 WNT6Q9Y6F9 365 aa13.94□□□□□ -0.18
CCDC50-201ENST00000392455 POP7O75817 140 aaKnown RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 SLC17A1Q14916 467 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 GPR22Q99680 433 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 DZANK1Q9NVP4 752 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 B3GAT1Q9P2W7 334 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TSPAN6O43657 245 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 EPHA1P21709 976 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TRHRP34981 398 aaPredicted RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 OR4D2P58180 307 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 CPEB3Q8NE35 698 aaKnown RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 MICU1Q9BPX6 476 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TMEM175Q9BSA9 504 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 GPR174Q9BXC1 333 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF160Q9HCG1 818 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 SLIT2O94813 1529 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 MAS1P04201 325 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 ABHD17BQ5VST6 288 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 OR52W1Q6IF63 320 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TMEM151BQ8IW70 566 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 C1orf87Q8N0U7 546 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 NAT8LQ8N9F0 302 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF516Q92618 1163 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 SLAMF7Q9NQ25 335 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 RGPD8O14715 1765 aaPredicted RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 WNT4P56705 351 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 FXYD4P59646 89 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 AVPI1Q5T686 147 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 BOLLQ8N9W6 283 aaKnown RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 LRIT2A6NDA9 550 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TMEM233B4DJY2 109 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 C6orf47O95873 294 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 CCL5P13501 91 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 KDM1BQ8NB78 822 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 ST7LQ8TDW4 575 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 PAQR8Q8TEZ7 354 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 ACTL7AQ9Y615 435 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 LRRC30A6NM36 301 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 WASH4PA8MWX3 477 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 CA12O43570 354 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 KCNQ1P51787 676 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 PRRT3Q5FWE3 981 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 ZNF546Q86UE3 836 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TMEM200AQ86VY9 491 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 TXNDC5Q8NBS9 432 aaKnown RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 LRR1Q96L50 414 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 CHRDQ9H2X0 955 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 MTHFD2LQ9H903 347 aaPredicted RBP13.93□□□□□ -0.18
CCDC50-201ENST00000392455 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
CCDC50-201ENST00000392455 OR2M5A3KFT3 312 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 UPK1BO75841 260 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 MCOLN1Q9GZU1 580 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 FZD8Q9H461 694 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 SVILO95425 2214 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 A8MT66 165 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 TRAPPC2LH3BP13 241 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ARHGAP33O14559 1287 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ASGR2P07307 311 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 MRPL3P09001 348 aaKnown RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 SMIM17P0DL12 118 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 IL1R2P27930 398 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ATP1B3P54709 279 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 UFM1P61960 85 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 SUSD1Q6UWL2 747 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 BTNL8Q6UX41 500 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 OR4A16Q8NH70 328 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 SLC2A6Q9UGQ3 507 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 KCNK6Q9Y257 313 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 LOC730098B7Z3J9 87 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 J3QRK9 145 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 HOXA1P49639 335 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 RBMS2Q15434 407 aaKnown RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 CRTC1Q6UUV9 634 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 DPPA2Q7Z7J5 298 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 CMTM8Q8IZV2 173 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 OR4F6Q8NGB9 312 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 OR13J1Q8NGT2 312 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 RNF141Q8WVD5 230 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 PCED1AQ9H1Q7 454 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 LIN7BQ9HAP6 207 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 LYRM2Q9NU23 88 aaPredicted RBP13.92□□□□□ -0.18
CCDC50-201ENST00000392455 CD8B2A6NJW9 211 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 ADAM11O75078 769 aa13.92□□□□□ -0.18
CCDC50-201ENST00000392455 CD8BP10966 210 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms