RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 TSTD2Q5T7W7 516 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 C9orf135Q5VTT2 229 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 FAM69BQ5VUD6 431 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 HLA-DQA1Q5Y7H0 255 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 CD276Q5ZPR3 534 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 CYB5R2Q6BCY4 276 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 GRHL2Q6ISB3 625 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 FAM166AQ6J272 317 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 RPL13AP3Q6NVV1 102 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 FAHD2BQ6P2I3 314 aaPredicted RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 ZNF474Q6S9Z5 364 aaPredicted RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 UQCC3Q6UW78 93 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 CWC27Q6UX04 472 aaKnown RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 SLCO4C1Q6ZQN7 724 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 ACOT7LQ6ZUV0 252 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 SLC16A14Q7RTX9 510 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 APTXQ7Z2E3 356 aaKnown RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 RNF144BQ7Z419 303 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 TMED4Q7Z7H5 227 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 S100A7AQ86SG5 101 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 PIM3Q86V86 326 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 GPBP1Q86WP2 473 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 XYLT1Q86Y38 959 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 RIMKLAQ8IXN7 391 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 STX19Q8N4C7 294 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 TMEM251Q8N6I4 163 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 C12orf76Q8N812 135 aaPredicted RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 INO80EQ8NBZ0 244 aaPredicted RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 SDR9C7Q8NEX9 313 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 OR5AU1Q8NGC0 362 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 OR1L6Q8NGR2 347 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 OR2Y1Q8NGV0 311 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 OR4Q3Q8NH05 313 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 OR52E5Q8NH55 327 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 OR51A7Q8NH64 312 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 MAGEE2Q8TD90 523 aaPredicted RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 PPP4R1Q8TF05 950 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 TMEM170AQ8WVE7 144 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 ALG3Q92685 438 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 WNT2BQ93097 391 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 RAB39BQ96DA2 213 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 WDR34Q96EX3 536 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 PELI1Q96FA3 418 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 FAHD2AQ96GK7 314 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 WDR92Q96MX6 357 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 KLHL32Q96NJ5 620 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 SORCS2Q96PQ0 1159 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 PPP1R2P1Q96PQ5 205 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 IL4I1Q96RQ9 567 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 MBOAT4Q96T53 435 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 STACQ99469 402 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 DDOQ99489 341 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 LGMNQ99538 433 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 MAP3K3Q99759 626 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 UBXN6Q9BZV1 441 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 TM6SF1Q9BZW5 370 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 DUSP15Q9H1R2 295 aaPredicted RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 CDCP1Q9H5V8 836 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 MARCH7Q9H992 704 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 CDH20Q9HBT6 801 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 FZD3Q9NPG1 666 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 POLE4Q9NR33 117 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 NANSQ9NR45 359 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 ASB6Q9NWX5 421 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 FAM30AQ9NZY2 134 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 NLKQ9UBE8 527 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 EPHA6Q9UF33 1036 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 MGAT4AQ9UM21 535 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 TESMINQ9Y4I5 508 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 LSM4Q9Y4Z0 139 aaKnown RBP3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 CDH10Q9Y6N8 788 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 ARHGEF10O15013 1369 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 POGZQ7Z3K3 1410 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 SCAPERQ9BY12 1400 aa3.1□□□□□ -1.91
TRAJ17-201ENST00000390520 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 A0A1W2PPK0 400 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 A0A1W2PPV9 198 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PSMB11A5LHX3 300 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 MEGF11A6BM72 1044 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 A6NNC1 897 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 EFCAB7A8K855 629 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PRSS46E5RG02 174 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RNF223E7ERA6 249 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 H0Y980 276 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PSMD12O00232 456 aaPredicted RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 IMPA2O14732 288 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PPP1R2P9O14990 202 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 PFDN6O15212 129 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 INPP4BO15327 924 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 ZNF749O43361 778 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 TGOLN2O43493 480 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 AGFG2O95081 481 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 RCBTB2O95199 551 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GJB5O95377 273 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 WDPCPO95876 746 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 NR3C1P04150 777 aa3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 GAPDHP04406 335 aaKnown RBP3.09□□□□□ -1.91
TRAJ17-201ENST00000390520 CD5P06127 495 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms