RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TBPL2Q6SJ96 375 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 CEACAM19Q7Z692 300 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 TSLPQ969D9 159 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF775Q96BV0 537 aaPredicted RBP12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 C8orf44Q96CB5 159 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 FAM210AQ96ND0 272 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 IFT46Q9NQC8 304 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 COMMD9Q9P000 198 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 MED16Q9Y2X0 877 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 CLCA1A8K7I4 914 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 CSN2P05814 226 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 RPS5P46782 204 aaKnown RBP12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 ADAM8P78325 824 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF404Q494X3 552 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 TCEAL6Q6IPX3 200 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 C1orf210Q8IVY1 113 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 POMT2Q9UKY4 750 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC22A7Q9Y694 548 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 FLRT2O43155 660 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 GIPRP48546 466 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF367Q7RTV3 350 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 CDH10Q9Y6N8 788 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 F13BP05160 661 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 LCKP06239 509 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 HNRNPA0Q13151 305 aaKnown RBP12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 C22orf42Q6IC83 251 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 GPALPP1Q8IXQ4 340 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 NRTNQ99748 197 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM9BQ9NQ34 198 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC25A37Q9NYZ2 338 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM9Q9P0T7 183 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 CD300AQ9UGN4 299 aa12.2□□□□□ -0.46
PTPRN2-202ENST00000389416 EP400Q96L91 3159 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 GJE1A6NN92 205 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PRODHO43272 600 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 UTS2O95399 124 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 MAPK3P27361 379 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TEAD1P28347 426 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 CA5AP35218 305 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 MPLP40238 635 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 ELAVL1Q15717 326 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 LINC01555Q8NAE3 123 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 OR4C15Q8NGM1 316 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 ZNF597Q96LX8 424 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TESQ9UGI8 421 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TVP23AA6NH52 213 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PAPLNO95428 1278 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 CD8BP10966 210 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 CD22P20273 847 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TACR3P29371 465 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 RUNX2Q13950 521 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM176BQ3YBM2 270 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PRAMEF17Q5VTA0 474 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 HMBOX1Q6NT76 420 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 ISOC1Q96CN7 298 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 ARSGQ96EG1 525 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PCED1AQ9H1Q7 454 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 IKZF5Q9H5V7 419 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 ABCD2Q9UBJ2 740 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TMPRSS11EQ9UL52 423 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 A0A1W2PQ72 361 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 SH3D21A4FU49 640 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 NOS1APO75052 506 aaPredicted RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 BCKDHBP21953 392 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 S100GP29377 79 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 GGT2P36268 569 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 EEF1A1P68104 462 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 LRIF1Q5T3J3 769 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TMPPEQ6ZT21 453 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PAQR7Q86WK9 346 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 OR7G2Q8NG99 324 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 OR13C2Q8NGS9 318 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TRUB1Q8WWH5 349 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 LGALS12Q96DT0 336 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PGAM5Q96HS1 289 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 FOXN4Q96NZ1 517 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 EGLN3Q9H6Z9 239 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 KCND3Q9UK17 655 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 SH3PXD2BA1X283 911 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 ANKRD28O15084 1053 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 RBMXL2O75526 392 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 PABPC4LP0CB38 370 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 OR3A3P47888 321 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 OR3A2P47893 321 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 SSR4P51571 173 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 RIDAP52758 137 aaKnown RBP12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 AP3S2P59780 193 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 BICRALQ6AI39 1079 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 SLC25A24Q6NUK1 477 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 TMEM38AQ9H6F2 299 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 FSCN3Q9NQT6 498 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 C2orf42Q9NWW7 574 aa12.19□□□□□ -0.46
PTPRN2-202ENST00000389416 A0A1W2PQF6 199 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 GREM1O60565 184 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 GASTP01350 101 aa12.18□□□□□ -0.46
PTPRN2-202ENST00000389416 TUBA1BP68363 451 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms