RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 KLHL9Q9P2J3 617 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 YY2O15391 372 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 GJB3O75712 270 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 TOXO94900 526 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 ABLIM3O94929 683 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 SLC2A5P22732 501 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 SGSHP51688 502 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 HES5Q5TA89 166 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 METTL4Q8N3J2 472 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 GCDHQ92947 438 aaPredicted RBP13.96□□□□□ -0.17
SNPH-202ENST00000381873 OR7D2Q96RA2 312 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 ANKRD60Q9BZ19 345 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 R3HDMLQ9H3Y0 253 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 ERVK13-1Q9NX77 482 aa13.96□□□□□ -0.17
SNPH-202ENST00000381873 SMCO3A2RU48 225 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 A8MV72 311 aaPredicted RBP13.96□□□□□ -0.18
SNPH-202ENST00000381873 CXCL10P02778 98 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 PSPHP78330 225 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 HSF5Q4G112 596 aaPredicted RBP13.96□□□□□ -0.18
SNPH-202ENST00000381873 SLC22A10Q63ZE4 541 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 PLAG1Q6DJT9 500 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 WDR53Q7Z5U6 358 aaPredicted RBP13.96□□□□□ -0.18
SNPH-202ENST00000381873 FBXO27Q8NI29 283 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 TBC1D15Q8TC07 691 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 CD300LFQ8TDQ1 290 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 NPRL2Q8WTW4 380 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 GTF2H4Q92759 462 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 NT5C3BQ969T7 300 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 ZNF587Q96SQ5 575 aaPredicted RBP13.96□□□□□ -0.18
SNPH-202ENST00000381873 C1QTNF2Q9BXJ5 285 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 NELFAQ9H3P2 528 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 CLMPQ9H6B4 373 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 FOLH1BQ9HBA9 442 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 SLC6A14Q9UN76 642 aa13.96□□□□□ -0.18
SNPH-202ENST00000381873 PCP4L1A6NKN8 68 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 SCRG1O75711 98 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 CNOT4O95628 575 aaKnown RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 LCKP06239 509 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 PBX2P40425 430 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 MAGEA3P43357 314 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 PTH2RP49190 550 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 AFF3P51826 1226 aaKnown RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 KEAP1Q14145 624 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 WBP2NLQ6ICG8 309 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ZNF285Q96NJ3 590 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 SLC29A1Q99808 456 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 MCOLN1Q9GZU1 580 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 OR52D1Q9H346 318 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 RANBP3Q9H6Z4 567 aaPredicted RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 GPN2Q9H9Y4 310 aaPredicted RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 MRPL15Q9P015 296 aaKnown RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 CDC14CA4D256 554 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 AKR1C4P17516 323 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 IDUAP35475 653 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 HBA1P69905 142 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ERV3-1Q14264 604 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 TMEM31Q5JXX7 168 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 TMEM244Q5VVB8 128 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 GPR139Q6DWJ6 353 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 SFRP4Q6FHJ7 346 aaPredicted RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 FRMPD2BQ6IN97 320 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 IL20RBQ6UXL0 311 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 MMP21Q8N119 569 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 MRPL38Q96DV4 380 aaKnown RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 SAP130Q9H0E3 1048 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ARL6Q9H0F7 186 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ENKD1Q9H0I2 346 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 POLE4Q9NR33 117 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ABRACLQ9P1F3 81 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 BOKQ9UMX3 212 aaPredicted RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 APC2O95996 2303 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 H0YIV9 168 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 MRPS14O60783 128 aaKnown RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 AGTR1P30556 359 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 SYPL1Q16563 259 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 CSNK2A3Q8NEV1 391 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 UBXN10Q96LJ8 280 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 A0A1B0GTW7 788 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 SLC16A7O60669 478 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 IGHEP01854 428 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ACPPP15309 386 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 LSSP48449 732 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 NFATC3Q12968 1075 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 FAM217AQ8IXS0 508 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 ZBTB8BQ8NAP8 495 aaPredicted RBP13.95□□□□□ -0.18
SNPH-202ENST00000381873 MFSD9Q8NBP5 474 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 THSD1Q9NS62 852 aa13.95□□□□□ -0.18
SNPH-202ENST00000381873 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.94□□□□□ -0.18
SNPH-202ENST00000381873 SERPINA5P05154 406 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 CD46P15529 392 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 IMPA1P29218 277 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 PPP5CP53041 499 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 CCDC58Q4VC31 144 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 OR5M10Q6IEU7 315 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 CBLL1Q75N03 491 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 ADAMTS19Q8TE59 1207 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 RAB9BQ9NP90 201 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 EMC3Q9P0I2 261 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 DNAJB11Q9UBS4 358 aa13.94□□□□□ -0.18
SNPH-202ENST00000381873 A0A1W2PQL4 384 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms