RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 ZNF17P17021 662 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 AGAP20933 346 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 TCEA1P23193 301 aaKnown RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 PTGER4P35408 488 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 SUCLG1P53597 346 aaKnown RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 CRISP3P54108 245 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 PER3P56645 1201 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 NUP107P57740 925 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 TRMT5Q32P41 509 aaKnown RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 RPS26P11Q5JNZ5 115 aaPredicted RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 C1orf185Q5T7R7 199 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 REP15Q6BDI9 236 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 NET1Q7Z628 596 aaPredicted RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 GGNQ86UU5 652 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 SNX32Q86XE0 403 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 PM20D2Q8IYS1 436 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 ZNF808Q8N4W9 903 aaPredicted RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 OR5W2Q8NH69 310 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 CNOT9Q92600 299 aaKnown RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 ZBTB8AQ96BR9 441 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 DTNBP1Q96EV8 351 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 ADGRG7Q96K78 797 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 TUBA1CQ9BQE3 449 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 KAT8Q9H7Z6 458 aaKnown RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 EXOSC3Q9NQT5 275 aaKnown RBP13.36□□□□□ -0.27
VCX3B-201ENST00000381029 CLCF1Q9UBD9 225 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 VDAC3Q9Y277 283 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 CAPN7Q9Y6W3 813 aa13.36□□□□□ -0.27
VCX3B-201ENST00000381029 CD8B2A6NJW9 211 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 BBIP1A8MTZ0 92 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 H0YC42 278 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 H3BNH8 94 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 LINC01387J3KSC0 135 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 GCM2O75603 506 aaPredicted RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 CSTAP01040 98 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 NID1P14543 1247 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 PRKCAP17252 672 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 IL11P20809 199 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 CEACAM8P31997 349 aaPredicted RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 TPD52P55327 224 aaPredicted RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 CLDN20P56880 219 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 EEF1A1P68104 462 aaKnown RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 PMPCAQ10713 525 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 CTU2Q2VPK5 515 aaKnown RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 NSUN5P2Q63ZY6 315 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 AAGABQ6PD74 315 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 POMZP3Q6PJE2 187 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 ENPP6Q6UWR7 440 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 RPTNQ6XPR3 784 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 B3GNT6Q6ZMB0 384 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 EIF3MQ7L2H7 374 aaKnown RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 MTDHQ86UE4 582 aaKnown RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 CMIPQ8IY22 773 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 METTL25Q8N6Q8 603 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 ZNF614Q8N883 585 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 PIGQQ9BRB3 760 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 SLC39A3Q9BRY0 314 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 DNAJB12Q9NXW2 375 aaKnown RBP13.35□□□□□ -0.27
VCX3B-201ENST00000381029 CALML5Q9NZT1 146 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 SLC35A3Q9Y2D2 325 aa13.35□□□□□ -0.27
VCX3B-201ENST00000381029 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 A0A0G2JPF8 293 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 CDHR4A6H8M9 788 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 HNRNPCL2B2RXH8 293 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 HNRNPCL3B7ZW38 293 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 HNRNPCL1O60812 293 aaKnown RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 SHOX2O60902 331 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 KRT34O76011 436 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 PGM3O95394 542 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 NPPAP01160 153 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 DBIP07108 87 aaKnown RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 UBTFL6P0CB48 400 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 HNRNPCL4P0DMR1 293 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 ESRRAP11474 423 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 PEPDP12955 493 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 ETS2P15036 469 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 ADH6P28332 368 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 MTPNP58546 118 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 HPCAP84074 193 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 FOXF1Q12946 379 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 NFYCQ13952 458 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 CAPRIN1Q14444 709 aaKnown RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 GCNT6Q5T4J0 391 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 RNF220Q5VTB9 566 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 TMEM211Q6ICI0 200 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 NANOGP8Q6NSW7 305 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 C8orf82Q6P1X6 216 aaPredicted RBP13.34□□□□□ -0.27
VCX3B-201ENST00000381029 XKRXQ6PP77 449 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 ZNF836Q6ZNA1 936 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 MRGPRGQ86SM5 289 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 CALHM3Q86XJ0 350 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 VRK2Q86Y07 508 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 GRAMD2AQ8IUY3 354 aa13.34□□□□□ -0.27
VCX3B-201ENST00000381029 EID3Q8N140 333 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms