RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 IL7P13232 177 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 DNAJB1P25685 340 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
CHD3-203ENST00000380358 NAT8LQ8N9F0 302 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 BEST4Q8NFU0 473 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TCTEX1D2Q8WW35 142 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 ASB11Q8WXH4 323 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 HHATLQ9HCP6 504 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 IL23AQ9NPF7 189 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 NCR1O76036 304 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 SEC14L2O76054 403 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 VASPP50552 380 aaPredicted RBP11.7□□□□□ -0.54
CHD3-203ENST00000380358 ACTC1P68032 377 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 ACTA1P68133 377 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 EMX2Q04743 252 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 SLC16A14Q7RTX9 510 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 RAB9BQ9NP90 201 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 XRCC3O43542 346 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 CDK1P06493 297 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 CDKN2DP55273 166 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 WDR4P57081 412 aaKnown RBP11.7□□□□□ -0.54
CHD3-203ENST00000380358 RNLSQ5VYX0 342 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TLDC1Q6P9B6 456 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 SULF2Q8IWU5 870 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 CMTM2Q8TAZ6 248 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 BORCS6Q96GS4 357 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TMEM19Q96HH6 336 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 MMP28Q9H239 520 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 XPNPEP1Q9NQW7 623 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 OBP2AQ9NY56 170 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 NRXN1Q9ULB1 1477 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 FCGR2AP12318 317 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 DCAF12Q5T6F0 453 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 ANKRD54Q6NXT1 300 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 SLC46A3Q7Z3Q1 461 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 INIPQ9NRY2 104 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 SIGLEC6O43699 453 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 RAB3DO95716 219 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 CLDN1O95832 211 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 MT-ND4P03905 459 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TCN2P20062 427 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 CSNK1EP49674 416 aaKnown RBP11.7□□□□□ -0.54
CHD3-203ENST00000380358 DAP3P51398 398 aaKnown RBP11.7□□□□□ -0.54
CHD3-203ENST00000380358 ARL6IP1Q15041 203 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 POU4F3Q15319 338 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 TMEM184AQ6ZMB5 413 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 ULBP2Q9BZM5 246 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 NMNAT2Q9BZQ4 307 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 UFSP2Q9NUQ7 469 aa11.7□□□□□ -0.54
CHD3-203ENST00000380358 ADGRB3O60242 1522 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 CER1O95813 267 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ALDOAP04075 364 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 NUDT7P0C024 238 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ZNF728P0DKX0 622 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 CEBPBP17676 345 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 FUT1P19526 365 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 HNRNPA2B1P22626 353 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 SF3B4Q15427 424 aaKnown RBP eCLIP11.69□□□□□ -0.541e-6■■■□□ 17.6
CHD3-203ENST00000380358 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 OR52E8Q6IFG1 317 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 TMEM64Q6YI46 380 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 AQP12AQ8IXF9 295 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 PDZD9Q8IXQ8 264 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 OR1J4Q8NGS1 313 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 C8orf33Q9H7E9 229 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 CD93Q9NPY3 652 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ACTR3BQ9P1U1 418 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ATG4BQ9Y4P1 393 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ATP23Q9Y6H3 246 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 SLC22A31A6NKX4 558 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 SLC16A7O60669 478 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 JAM2P57087 298 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 TMEM176BQ3YBM2 270 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 TMEM139Q8IV31 216 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 MISPQ8IVT2 679 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ACBD7Q8N6N7 88 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 KIAA1191Q96A73 305 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ZNF689Q96CS4 500 aaPredicted RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 AQP7P3A6NL99 342 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 CTRB1P17538 263 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 C5AR1P21730 350 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 EMC10Q5UCC4 262 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 ATG9BQ674R7 924 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 CTRB2Q6GPI1 263 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 OR5W2Q8NH69 310 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 SGPP1Q9BX95 441 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 SHARPINQ9H0F6 387 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 GSTO2Q9H4Y5 243 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 WDR6Q9NNW5 1121 aaKnown RBP11.69□□□□□ -0.54
CHD3-203ENST00000380358 KCNJ16Q9NPI9 418 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 PTTG2Q9NZH5 202 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 LUZP4Q9P127 313 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 TSTD3H0UI37 97 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 TFP02787 698 aa11.69□□□□□ -0.54
CHD3-203ENST00000380358 MAKP20794 623 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms