RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 GSTK1Q9Y2Q3 226 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 GOLT1BQ9Y3E0 138 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 CHTOPQ9Y3Y2 248 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 PRKAB1Q9Y478 270 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 NYNRINQ9P2P1 1898 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 BLOC1S5-TXNDC5H3BN57 136 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 EREGO14944 169 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 DPM1O60762 260 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 YIF1AO95070 293 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 C1QCP02747 245 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 WNT1P04628 370 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 EBLN1P0CF75 366 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 IDSP22304 550 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 CNR2P34972 360 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 MAP3K8P41279 467 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 RFX3P48380 749 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 PITPNBP48739 271 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 MVDP53602 400 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 PPIAP62937 165 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF177Q13360 481 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 SLC5A12Q1EHB4 618 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 RFTN2Q52LD8 501 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ARSIQ5FYB1 569 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ATAT1Q5SQI0 421 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 FBXL22Q6P050 247 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 CERS6Q6ZMG9 384 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 RNF165Q6ZSG1 346 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 TSEN54Q7Z6J9 526 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 OR56A4Q8NGH8 313 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 OR5M3Q8NGP4 307 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 MYLIPQ8WY64 445 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ATOH8Q96SQ7 321 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 WDR26Q9H7D7 661 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ACKR4Q9NPB9 350 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 PRDM7Q9NQW5 492 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 GLRX2Q9NS18 164 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 DNAJC27Q9NZQ0 273 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 LSM7Q9UK45 103 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF840PA6NDX5 716 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 IMPA2O14732 288 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 WNT9AO14904 365 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SUV39H1O43463 412 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SLC28A2O43868 658 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SLC25A12O75746 678 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 RPP40O75818 363 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 PMP2P02689 132 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 HMBSP08397 361 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 NPSP0C0P6 89 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 HSD3B1P14060 373 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CSF2RAP15509 400 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 C5AR1P21730 350 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 RBMS1P29558 406 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 HTR6P50406 440 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CDK6Q00534 326 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 ABHD18Q0P651 414 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 EFEMP1Q12805 493 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 GINS1Q14691 196 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 TGIF1Q15583 401 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 MPPED2Q15777 294 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 ARHGAP40Q5TG30 622 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 HACD4Q5VWC8 232 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 IL20RBQ6UXL0 311 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 LRRC28Q86X40 367 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CPEB3Q8NE35 698 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 OR56A3Q8NH54 315 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 R3HDM4Q96D70 268 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 MED8Q96G25 268 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM169Q96HH4 297 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SCLYQ96I15 445 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CAMK1GQ96NX5 476 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 F2RL3Q96RI0 385 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SEC11CQ9BY50 192 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 GPR62Q9BZJ7 368 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 NANSQ9NR45 359 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 OPN4Q9UHM6 478 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 TNFRSF11BO00300 401 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SOX15O60248 233 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 MPZL2O60487 215 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 PRAF2O60831 178 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 SOCS5O75159 536 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 UBBP0CG47 229 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 UBCP0CG48 685 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CPN1P15169 458 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 AVPR2P30518 371 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 OR1E1P30953 314 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 RPS27AP62979 156 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 UBA52P62987 128 aaKnown RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 GPNMBQ14956 572 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM35AQ53FP2 167 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 FBXO46Q6PJ61 603 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CD200R1LQ6Q8B3 271 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 MSANTD1Q6ZTZ1 278 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 CBLL1Q75N03 491 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 OR2W3Q7Z3T1 314 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 WDR53Q7Z5U6 358 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-201ENST00000379989 OAFQ86UD1 273 aa6.97□□□□□ -1.29
CDKL5-201ENST00000379989 COMTD1Q86VU5 262 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms