RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SMARCD3Q6STE5 483 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 SPRED2Q7Z698 418 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 NKAIN4Q8IVV8 208 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 SIAH3Q8IW03 269 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 RAB42Q8N4Z0 105 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 ZBTB44Q8NCP5 570 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 OR2T35Q8NGX2 323 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 KCTD12Q96CX2 325 aaKnown RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 KCMF1Q9P0J7 381 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 TMEM5Q9Y2B1 443 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 EXOGQ9Y2C4 368 aaKnown RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 C1QTNF3-AMACRE9PGA6 284 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 KHNYNO15037 678 aaKnown RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 FZD7O75084 574 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 FOSL1P15407 271 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 THBS2P35442 1172 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 MC3RP41968 323 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 CBX5P45973 191 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 OMPP47874 163 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 RNF144AP50876 292 aaPredicted RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 RAB28P51157 221 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 GBX2P52951 348 aaPredicted RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 OR10A3P58181 314 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 CLVS2Q5SYC1 327 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 HACD4Q5VWC8 232 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 ABHD17CQ6PCB6 329 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 RASSF6Q6ZTQ3 369 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 ZNF687Q8N1G0 1237 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 BBS1Q8NFJ9 593 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 TTLQ8NG68 377 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 OR4Q3Q8NH05 313 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 SPPL3Q8TCT6 385 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 RIT1Q92963 219 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 ERMAPQ96PL5 475 aaPredicted RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 IL23AQ9NPF7 189 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 PRSS16Q9NQE7 514 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 H2AFY2Q9P0M6 372 aaPredicted RBP15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 COPZ2Q9P299 210 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 TNFRSF10DQ9UBN6 386 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 ENTPD4Q9Y227 616 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 LIPT1Q9Y234 373 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 INSL6Q9Y581 213 aa15.45■□□□□ 0.06
PCDHA1-201ENST00000378133 OR52A4PA6NMU1 304 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 IGHA1P01876 353 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 HRGP04196 525 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ATP5A1P25705 553 aaKnown RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 CERS1P27544 350 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 BMP8BP34820 402 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 TRIM23P36406 574 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 GPR4P46093 362 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ST3GAL3Q11203 375 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 KRT33BQ14525 404 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ZIC1Q15915 447 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 TMEM35AQ53FP2 167 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 BMP8AQ7Z5Y6 402 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 FTMTQ8N4E7 242 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 NUP43Q8NFH3 380 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 OR9A2Q8NGT5 310 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 DIO2Q92813 273 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 SPRTNQ9H040 489 aaPredicted RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 BEX1Q9HBH7 125 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 POLMQ9NP87 494 aaPredicted RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 MRPS30Q9NP92 439 aaKnown RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ACSL5Q9ULC5 683 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 PLEKHM1Q9Y4G2 1056 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 SIRT4Q9Y6E7 314 aaPredicted RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ARPC4-TTLL3A0A0A6YYG9 625 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 FCMRO60667 390 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 NFATC1O95644 943 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 PAK4O96013 591 aaPredicted RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 LCN1P31025 176 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 FZD5Q13467 585 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ZSWIM7Q19AV6 140 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 HSD17B12Q53GQ0 312 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 SFXN4Q6P4A7 337 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 KANSL1Q7Z3B3 1105 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 OR56A1Q8NGH5 318 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 SFXN5Q8TD22 340 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 KAT2AQ92830 837 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 ZNF707Q96C28 371 aaPredicted RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 FCRL4Q96PJ5 515 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 C1QTNF6Q9BXI9 259 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 HDAC8Q9BY41 377 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 SYNPO2LQ9H987 977 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 CLEC4AQ9UMR7 237 aa15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 MRPS7Q9Y2R9 242 aaKnown RBP15.44■□□□□ 0.06
PCDHA1-201ENST00000378133 SCAMP1O15126 338 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 SURF4O15260 269 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 SLC2A10O95528 541 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 HNRNPA1P09651 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 ACSM4P0C7M7 580 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 CSNK2A2P19784 350 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 PRR5P85299 388 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 FAM27D1Q5T7N8 215 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 MRM1Q6IN84 353 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 LURAP1LQ8IV03 231 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 C12orf76Q8N812 135 aaPredicted RBP15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 PIGXQ8TBF5 258 aa15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 TRMT10AQ8TBZ6 339 aaKnown RBP15.43■□□□□ 0.06
PCDHA1-201ENST00000378133 BADQ92934 168 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms