RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GJE1A6NN92 205 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 C9JVG2 144 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 MSTNO14793 375 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 KIAA0513O60268 411 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 DIAPH2O60879 1101 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 SLC22A3O75751 556 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 IL6P05231 212 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 PSMA4P25789 261 aaKnown RBP15.12■□□□□ 0.01
HMGN4-201ENST00000377575 IL12AP29459 219 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 CPOXP36551 454 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 RNF144AP50876 292 aaPredicted RBP15.12■□□□□ 0.01
HMGN4-201ENST00000377575 CCR4P51679 360 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 CASP9P55211 416 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 CBFBQ13951 182 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF141Q15928 474 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 MAVSQ7Z434 540 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 OR10D3Q8NH80 312 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 OR2V1Q8NHB1 315 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 POC1BQ8TC44 478 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 DYDC1Q8WWB3 177 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 MARK4Q96L34 752 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 PRRG4Q9BZD6 226 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 TMEM185BQ9H7F4 350 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 ZIM2Q9NZV7 527 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 MKLN1Q9UL63 735 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 WDR45Q9Y484 360 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 USH1CQ9Y6N9 552 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 OTOGQ6ZRI0 2925 aa15.12■□□□□ 0.01
HMGN4-201ENST00000377575 UQCRHLA0A096LP55 91 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 CCDC154A6NI56 674 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 TNFSF11O14788 317 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 ADAMDEC1O15204 470 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 UBDO15205 165 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 OIP5O43482 229 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 UGT2B17O75795 530 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 SMNDC1O75940 238 aaKnown RBP eCLIP15.11■□□□□ 0.01
HMGN4-201ENST00000377575 SYNGR4O95473 234 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 CTU2Q2VPK5 515 aaKnown RBP15.11■□□□□ 0.01
HMGN4-201ENST00000377575 NDUFAF6Q330K2 333 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 TTMPQ5BVD1 217 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 HBMQ6B0K9 141 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 EIF3MQ7L2H7 374 aaKnown RBP15.11■□□□□ 0.01
HMGN4-201ENST00000377575 RNF130Q86XS8 419 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 OR5W2Q8NH69 310 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 RFWD2Q8NHY2 731 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 GPR119Q8TDV5 335 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 RAB8BQ92930 207 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 ROPN1LQ96C74 230 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 ADGRG7Q96K78 797 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 MRGPRX4Q96LA9 322 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 KLHL15Q96M94 604 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 NPAS1Q99742 590 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 VIPAS39Q9H9C1 493 aa15.11■□□□□ 0.01
HMGN4-201ENST00000377575 SDR39U1Q9NRG7 319 aaPredicted RBP15.11■□□□□ 0.01
HMGN4-201ENST00000377575 MPDZO75970 2070 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 A6NNC1 897 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 A8MXE2 369 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 HMGB1P1B2RPK0 211 aaPredicted RBP15.1■□□□□ 0.01
HMGN4-201ENST00000377575 RFXANKO14593 260 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF195O14628 629 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 FCMRO60667 390 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 CTAG2O75638 210 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 GOSR1O95249 250 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 TGDSO95455 350 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 PLGP00747 810 aaPredicted RBP15.1■□□□□ 0.01
HMGN4-201ENST00000377575 CSTAP01040 98 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 PRKCAP17252 672 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 SIRPAP78324 504 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 FUT5Q11128 374 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 SELENBP1Q13228 472 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 SKP2Q13309 424 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 GPAT3Q53EU6 434 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 TYW3Q6IPR3 259 aaKnown RBP15.1■□□□□ 0.01
HMGN4-201ENST00000377575 VWA1Q6PCB0 445 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF621Q6ZSS3 439 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 MSANTD1Q6ZTZ1 278 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 LILRA2Q8N149 483 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF619Q8N2I2 560 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 MIER2Q8N344 545 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 FBXO27Q8NI29 283 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 STARD4Q96DR4 205 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 ARSGQ96EG1 525 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 OR52B2Q96RD2 323 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 KLHDC3Q9BQ90 382 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 GPATCH1Q9BRR8 931 aaKnown RBP15.1■□□□□ 0.01
HMGN4-201ENST00000377575 INPP5KQ9BT40 448 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 LAT2Q9GZY6 243 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 RMND5AQ9H871 391 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 TIGARQ9NQ88 270 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 DNAJB12Q9NXW2 375 aaKnown RBP15.1■□□□□ 0.01
HMGN4-201ENST00000377575 LIPT1Q9Y234 373 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 SLC35A3Q9Y2D2 325 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 EMC9Q9Y3B6 208 aa15.1■□□□□ 0.01
HMGN4-201ENST00000377575 HMGN4O00479 90 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 POLR3GO15318 223 aaPredicted RBP15.09■□□□□ 0.01
HMGN4-201ENST00000377575 CXCL13O43927 109 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 CYP7B1O75881 506 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 AQP8O94778 261 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 KRT75O95678 551 aa15.09■□□□□ 0.01
HMGN4-201ENST00000377575 OPN1LWP04000 364 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms