RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 B4GALNT2Q8NHY0 566 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 RFWD2Q8NHY2 731 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 ADGRG7Q96K78 797 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 ZIM3Q96PE6 472 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 STACQ99469 402 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 BDH2Q9BUT1 245 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 PIGUQ9H490 435 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 AKTIPQ9H8T0 292 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 PLSCR4Q9NRQ2 329 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 MED17Q9NVC6 651 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 CLEC4AQ9UMR7 237 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 STAB1Q9NY15 2570 aa17.14■□□□□ 0.33
CBWD3-204ENST00000377349 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-204ENST00000377349 GTPBP1O00178 669 aaKnown RBP17.13■□□□□ 0.33
CBWD3-204ENST00000377349 TNFSF11O14788 317 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 TM9SF1O15321 606 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 KRT16P08779 473 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 PTH2RP49190 550 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 CCR4P51679 360 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 CASP9P55211 416 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 EXOC3L2Q2M3D2 409 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 NDUFAF6Q330K2 333 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 OR4F3Q6IEY1 312 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 STAC2Q6ZMT1 411 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 CLECL1Q8IZS7 167 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 OR4A15Q8NGL6 344 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 MGARPQ8TDB4 240 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 MDFIQ99750 246 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 KLHDC3Q9BQ90 382 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 KLHL4Q9C0H6 718 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 BHLHE41Q9C0J9 482 aaPredicted RBP17.13■□□□□ 0.33
CBWD3-204ENST00000377349 DUSP22Q9NRW4 184 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 KCNE3Q9Y6H6 103 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 MXRA5Q9NR99 2828 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 A0A087WZY1 265 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 H3BNH8 94 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 BIRC5O15392 142 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 SYNGR4O95473 234 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 NGFRP08138 427 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 FCGR2AP12318 317 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 PAX1P15863 534 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 ZNF17P17021 662 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 PSMA4P25789 261 aaKnown RBP17.13■□□□□ 0.33
CBWD3-204ENST00000377349 PCSK6P29122 969 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 SFTPDP35247 375 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 RPL14P50914 215 aaKnown RBP17.13■□□□□ 0.33
CBWD3-204ENST00000377349 HBA1P69905 142 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 ZNF117Q03924 483 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 EMX2Q04743 252 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 PLPPR5Q32ZL2 321 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 HHATQ5VTY9 493 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 ANKRD46Q86W74 232 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 MISPQ8IVT2 679 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 NATD1Q8N6N6 113 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 ATP6V1C2Q8NEY4 427 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 OR6K3Q8NGY3 331 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 OR10D3Q8NH80 312 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 SFXN5Q8TD22 340 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 ZBTB8AQ96BR9 441 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 COQ8BQ96D53 544 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 OR7D2Q96RA2 312 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 NUF2Q9BZD4 464 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 DPY30Q9C005 99 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 HHATLQ9HCP6 504 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 GPATCH2Q9NW75 528 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 CARD8Q9Y2G2 431 aa17.13■□□□□ 0.33
CBWD3-204ENST00000377349 RNF103-CHMP3A0A140T963 221 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 CXCL13O43927 109 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 SS18L1O75177 396 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-204ENST00000377349 CYP7B1O75881 506 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 CPSF4O95639 269 aaKnown RBP17.12■□□□□ 0.33
CBWD3-204ENST00000377349 PLAUP00749 431 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 IL11P20809 199 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 CTBP2P56545 445 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 NME5P56597 212 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 FOXF1Q12946 379 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 STX3Q13277 289 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 CAPRIN1Q14444 709 aaKnown RBP17.12■□□□□ 0.33
CBWD3-204ENST00000377349 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 RIMKLAQ8IXN7 391 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 GTPBP8Q8N3Z3 284 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-204ENST00000377349 MOAP1Q96BY2 351 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 GMPPAQ96IJ6 420 aaPredicted RBP17.12■□□□□ 0.33
CBWD3-204ENST00000377349 SLC35G5Q96KT7 338 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 TMEM204Q9BSN7 226 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 C20orf27Q9GZN8 174 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 MCTS1Q9ULC4 181 aaKnown RBP17.12■□□□□ 0.33
CBWD3-204ENST00000377349 PCDHGB4Q9UN71 923 aa17.12■□□□□ 0.33
CBWD3-204ENST00000377349 NID1P14543 1247 aa17.11■□□□□ 0.33
CBWD3-204ENST00000377349 CLDN8P56748 225 aa17.11■□□□□ 0.33
CBWD3-204ENST00000377349 GPR68Q15743 365 aa17.11■□□□□ 0.33
CBWD3-204ENST00000377349 BEX5Q5H9J7 111 aa17.11■□□□□ 0.33
CBWD3-204ENST00000377349 HBMQ6B0K9 141 aa17.11■□□□□ 0.33
CBWD3-204ENST00000377349 ZNF704Q6ZNC4 412 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-204ENST00000377349 SSU72Q9NP77 194 aaKnown RBP17.11■□□□□ 0.33
CBWD3-204ENST00000377349 ZNF701Q9NV72 531 aaPredicted RBP17.11■□□□□ 0.33
CBWD3-204ENST00000377349 PNPOQ9NVS9 261 aa17.11■□□□□ 0.33
CBWD3-204ENST00000377349 EMC9Q9Y3B6 208 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms