RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 FAM71CQ8NEG0 241 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 TOR1AIP2Q8NFQ8 470 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF563Q8TA94 476 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 RNF217Q8TC41 542 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 RNF138Q8WVD3 245 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 HAS2Q92819 552 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 EXTL1Q92935 676 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 C5orf34Q96MH7 638 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF347Q96SE7 839 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 PIP5K1AQ99755 562 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 PKP2Q99959 881 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 RNF32Q9H0A6 362 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 RNPEPL1Q9HAU8 725 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 EXOSC3Q9NQT5 275 aaKnown RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 MED11Q9P086 117 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 NKX1-2Q9UD57 310 aaPredicted RBP11.82□□□□□ -0.52
CBWD3-203ENST00000377344 IGF2RP11717 2491 aa11.82□□□□□ -0.52
CBWD3-203ENST00000377344 ANKRD33BA6NCL7 494 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 MKRN2OSH3BPM6 223 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CLOCKO15516 846 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CDC40O60508 579 aaKnown RBP eCLIP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 SEMA7AO75326 666 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 DEAF1O75398 565 aaPredicted RBP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 UQCRBP14927 111 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 RRM2P31350 389 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 IFNA8P32881 189 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 EPS8Q12929 822 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 KCNAB2Q13303 367 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CBFBQ13951 182 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 TBR1Q16650 682 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 IQCCQ4KMZ1 466 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 OR2T5Q6IEZ7 315 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 LILRA2Q8N149 483 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 PQLC1Q8N2U9 271 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CATSPER1Q8NEC5 780 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 OR4K17Q8NGC6 315 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 OR2T29Q8NH02 315 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 ADAMTS16Q8TE57 1224 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 SLC35B4Q969S0 331 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 SMAD5Q99717 465 aaKnown RBP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF559Q9BR84 538 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 FNDC11Q9BVV2 318 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 HES7Q9BYE0 225 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 TMEM27Q9HBJ8 222 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 AGPAT4Q9NRZ5 378 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 RPS6KB2Q9UBS0 482 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 DNAJB9Q9UBS3 223 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 ICAM5Q9UMF0 924 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 U3KQV3 271 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 A0A0G2JMM0 328 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 A0A1W2PPB8 328 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 A0A1W2PRS3 328 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 KIR3DP1A8MWS1 328 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CDK2AP1O14519 115 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 ADAM10O14672 748 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 E2F6O75461 281 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 SNX4O95219 450 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CD46P15529 392 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CNR1P21554 472 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 HTR2AP28223 471 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 ACAA2P42765 397 aaKnown RBP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 SLC6A8P48029 635 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 IDH2P48735 452 aaKnown RBP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CDH12P55289 794 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 PPP1R8Q12972 351 aaKnown RBP11.81□□□□□ -0.52
CBWD3-203ENST00000377344 OR1Q1Q15612 314 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 ATP6AP1Q15904 470 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 HMBOX1Q6NT76 420 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 OR52J3Q8NH60 311 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 OR5W2Q8NH69 310 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 TM9SF4Q92544 642 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 PRRC1Q96M27 445 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 KLHDC3Q9BQ90 382 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 BDH2Q9BUT1 245 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 DSN1Q9H410 356 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 PROK2Q9HC23 129 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 DEPPQ9NTK1 212 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 CSAG2Q9Y5P2 127 aa11.81□□□□□ -0.52
CBWD3-203ENST00000377344 FFAR1O14842 300 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 ADAMDEC1O15204 470 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 FMO6PO60774 539 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 GADD45GO95257 159 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 SP1P08047 785 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 PGCP20142 388 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 TNFSF10P50591 281 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 SLC25A25Q6KCM7 469 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 IGFL2Q6UWQ7 119 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 GALNTL5Q7Z4T8 443 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 TSPYL5Q86VY4 417 aaPredicted RBP11.8□□□□□ -0.52
CBWD3-203ENST00000377344 PLCZ1Q86YW0 608 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 ZADH2Q8N4Q0 377 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 WDSUB1Q8N9V3 476 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 ICA1LQ8NDH6 482 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 OR1J4Q8NGS1 313 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 ZNF597Q96LX8 424 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 TRIM2Q9C040 744 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 PTGES2Q9H7Z7 377 aa11.8□□□□□ -0.52
CBWD3-203ENST00000377344 REEP1Q9H902 201 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms