RNA–Protein interactions for RNA: ENST00000376395.8

UBQLN1-202, Transcript of ubiquilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN1, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-202ENST00000376395 SYNPO2LQ9H987 977 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 Q9N2J8 555 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 KCMF1Q9P0J7 381 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 FBXL3Q9UKT7 428 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 FAM186AA6NE01 2351 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 RFPL3O75679 317 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 CSTAP01040 98 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 GPLD1P80108 840 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 C1orf61Q13536 156 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 PAQR7Q86WK9 346 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 PLCZ1Q86YW0 608 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 MS4A15Q8N5U1 240 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 OR2L5Q8NG80 312 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 TBC1D20Q96BZ9 403 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 BPIFA2Q96DR5 249 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 MKRN2Q9H000 416 aaKnown RBP13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 PNO1Q9NRX1 252 aaKnown RBP13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 ACSS1Q9NUB1 689 aaPredicted RBP13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 A4GNTQ9UNA3 340 aa13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
UBQLN1-202ENST00000376395 ACOD1A6NK06 481 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 TEAD1P28347 426 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 BCL6P41182 706 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 TM4SF4P48230 202 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 RFX2P48378 723 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ASAH1Q13510 395 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 CRMP1Q14194 572 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 CST6Q15828 149 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ZNF79Q15937 498 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 WDR45BQ5MNZ6 344 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ATCAYQ86WG3 371 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 SIMC1Q8NDZ2 872 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 SMPDL3BQ92485 455 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 GHSRQ92847 366 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ELMOD3Q96FG2 381 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 RAD9AQ99638 391 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 SGPP1Q9BX95 441 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 TRIM2Q9C040 744 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 UBQLN3Q9H347 655 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 GXYLT2A0PJZ3 443 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 A8MVJ9 347 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 B4DGG1 531 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 FZD7O75084 574 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 CLEC3AO75596 197 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 PRKCAP17252 672 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 VAMP1P23763 118 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 BSGP35613 385 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 P2RY2P41231 377 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 OR3A3P47888 321 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 GPR176Q14439 515 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 PRSS53Q2L4Q9 553 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ZNF776Q68DI1 518 aaPredicted RBP13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 LYPD8Q6UX82 237 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 PFN4Q8NHR9 129 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 COQ10AQ96MF6 247 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 MBNL1Q9NR56 388 aaKnown RBP13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 GPR55Q9Y2T6 319 aaPredicted RBP13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 RNF13O43567 381 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ALDOBP05062 364 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 CLUP10909 449 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ATP5A1P25705 553 aaKnown RBP13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 NDUFS1P28331 727 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 SNTA1Q13424 505 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 OCLNQ16625 522 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 MRPL2Q5T653 305 aaKnown RBP13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 RFPL4BQ6ZWI9 263 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 SFTPA1Q8IWL2 248 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 OR2M4Q96R27 311 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 SLC6A17Q9H1V8 727 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 FN3KQ9H479 309 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 LAMP5Q9UJQ1 280 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 IER3IP1Q9Y5U9 82 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 CABIN1Q9Y6J0 2220 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 TRPM6Q9BX84 2022 aa13.81□□□□□ -0.2
UBQLN1-202ENST00000376395 ALX3O95076 343 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 LGI1O95970 557 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 GDF7Q7Z4P5 450 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 COMMD7Q86VX2 200 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 BOLLQ8N9W6 283 aaKnown RBP13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 SPHK1Q9NYA1 384 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 RCE1Q9Y256 329 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 ARPC1BO15143 372 aaKnown RBP13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 PRKNO60260 465 aaPredicted RBP13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 ETV6P41212 452 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 TSEN54Q7Z6J9 526 aaKnown RBP13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 GPA33Q99795 319 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 METTL17Q9H7H0 456 aaPredicted RBP13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 GPR34Q9UPC5 381 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 RP1P56715 2156 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 RENP00797 406 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 PIPP12273 146 aaPredicted RBP13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 GTF2F2P13984 249 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 CPEP16870 476 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 MVDP53602 400 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 AMZ1Q400G9 498 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 ARTNQ5T4W7 220 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 THAP4Q8WY91 577 aa13.8□□□□□ -0.2
UBQLN1-202ENST00000376395 RAB7BQ96AH8 199 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms