RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 NUP107P57740 925 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 CD47Q08722 323 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 TOP3AQ13472 1001 aaPredicted RBP19.46■□□□□ 0.71
HLA-C-201ENST00000376228 EBPQ15125 230 aaKnown RBP19.46■□□□□ 0.71
HLA-C-201ENST00000376228 DEFB109BQ30KR1 87 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 C1orf94Q6P1W5 598 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 PGBD2Q6P3X8 592 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 TSPAN14Q8NG11 270 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 ADAMTS16Q8TE57 1224 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 COPS7AQ9UBW8 275 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 NXT1Q9UKK6 140 aaKnown RBP19.46■□□□□ 0.71
HLA-C-201ENST00000376228 PCDHGA6Q9Y5G7 932 aa19.46■□□□□ 0.71
HLA-C-201ENST00000376228 ATRXP46100 2492 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 PIEZO2Q9H5I5 2752 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 NPIPA5A0A0B4J1W7 369 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 CDC14CA4D256 554 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 DPPA5A6NC42 116 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 NPIPA7E9PJI5 369 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 OR10H3O60404 316 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 SEC24DO94855 1032 aaPredicted RBP19.45■□□□□ 0.7
HLA-C-201ENST00000376228 CLPTM1O96005 669 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 NPIPA8P0DM63 369 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 EPHA2P29317 976 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 ADH7P40394 386 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 UGT2B15P54855 530 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 CXCR4P61073 352 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 RPS15P62841 145 aaKnown RBP19.45■□□□□ 0.7
HLA-C-201ENST00000376228 C6orf141Q5SZD1 244 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 PDZK1Q5T2W1 519 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 KLHL17Q6TDP4 642 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 FAM198BQ6UWH4 519 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 PLEKHM3Q6ZWE6 761 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 ANKRD37Q7Z713 158 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 PRSS58Q8IYP2 241 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 EXD3Q8N9H8 876 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF566Q969W8 418 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 SPSB2Q99619 263 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 UCK2Q9BZX2 261 aa19.45■□□□□ 0.7
HLA-C-201ENST00000376228 NXF5Q9H1B4 397 aaKnown RBP19.45■□□□□ 0.7
HLA-C-201ENST00000376228 C2orf92A0A1B0GVN3 265 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 GGT2P36268 569 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 IFNGR2P38484 337 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 EMP2P54851 167 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 ALDH6A1Q02252 535 aaKnown RBP19.44■□□□□ 0.7
HLA-C-201ENST00000376228 PLAURQ03405 335 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 BORAQ6PGQ7 559 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 TMEM205Q6UW68 189 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 LANCL3Q6ZV70 420 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF441Q8N8Z8 693 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 NFAM1Q8NET5 270 aaPredicted RBP19.44■□□□□ 0.7
HLA-C-201ENST00000376228 OR4K5Q8NGD3 323 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 METTL21AQ8WXB1 218 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 ACOT11Q8WXI4 607 aaPredicted RBP19.44■□□□□ 0.7
HLA-C-201ENST00000376228 HSPBAP1Q96EW2 488 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF559Q9BR84 538 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 REV1Q9UBZ9 1251 aa19.44■□□□□ 0.7
HLA-C-201ENST00000376228 FARSAQ9Y285 508 aaKnown RBP19.44■□□□□ 0.7
HLA-C-201ENST00000376228 A0A087WUU8 490 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 A0A087WXM4 84 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 TRAPPC13A5PLN9 417 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 SAGE2PA6NJ88 616 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 CPSF4LA6NMK7 179 aaKnown RBP19.43■□□□□ 0.7
HLA-C-201ENST00000376228 TFAP2AP05549 437 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 CCDC159P0C7I6 412 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 CYP4B1P13584 511 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 OSMP13725 252 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 RPL5P46777 297 aaKnown RBP19.43■□□□□ 0.7
HLA-C-201ENST00000376228 HLCSP50747 726 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 TEKQ02763 1124 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 CDK5R2Q13319 367 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 IL10RAQ13651 578 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 SLC29A4Q7RTT9 530 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 GDF7Q7Z4P5 450 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 C9orf40Q8IXQ3 194 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 GTPBP3Q969Y2 492 aaKnown RBP19.43■□□□□ 0.7
HLA-C-201ENST00000376228 TP53INP1Q96A56 240 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 WBP1Q96G27 269 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 SLC41A3Q96GZ6 507 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 GPR87Q9BY21 358 aa19.43■□□□□ 0.7
HLA-C-201ENST00000376228 CNOT3O75175 753 aaKnown RBP19.42■□□□□ 0.7
HLA-C-201ENST00000376228 C1QL1O75973 258 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 THY1P04216 161 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 GSTM3P21266 225 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 CRISP1P54107 249 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 NR1H2P55055 460 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 CTU2Q2VPK5 515 aaKnown RBP19.42■□□□□ 0.7
HLA-C-201ENST00000376228 KLHL26Q53HC5 615 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 LAIR2Q6ISS4 152 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF613Q6PF04 617 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 ZNF550Q7Z398 422 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 ZER1Q7Z7L7 766 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 LSM14AQ8ND56 463 aaKnown RBP19.42■□□□□ 0.7
HLA-C-201ENST00000376228 B3GNT7Q8NFL0 401 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 PRR14Q9BWN1 585 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 WWTR1Q9GZV5 400 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 UBQLN4Q9NRR5 601 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 DNAJB12Q9NXW2 375 aaKnown RBP19.42■□□□□ 0.7
HLA-C-201ENST00000376228 BLOC1S6Q9UL45 172 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 SLC35A3Q9Y2D2 325 aa19.42■□□□□ 0.7
HLA-C-201ENST00000376228 SERINC4A6NH21 518 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms