RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 MDFIQ99750 246 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 ACTRT3Q9BYD9 372 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 POTEKPQ9BYX7 375 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 SIRT3Q9NTG7 399 aaPredicted RBP20.65■□□□□ 0.9
C9orf47-202ENST00000375850 ATAD3AQ9NVI7 634 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 KLHL9Q9P2J3 617 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 BAIAP2L1Q9UHR4 511 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 ICAM5Q9UMF0 924 aa20.65■□□□□ 0.9
C9orf47-202ENST00000375850 FAF1Q9UNN5 650 aaPredicted RBP20.65■□□□□ 0.9
C9orf47-202ENST00000375850 SCAMP2O15127 329 aaKnown RBP20.64■□□□□ 0.89
C9orf47-202ENST00000375850 LINC00032P0C843 101 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 BCKDHAP12694 445 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 ITGADQ13349 1161 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 VEZF1Q14119 521 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 CAPRIN1Q14444 709 aaKnown RBP20.64■□□□□ 0.89
C9orf47-202ENST00000375850 TAB1Q15750 504 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 HEPHL1Q6MZM0 1159 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 C10orf107Q8IVU9 208 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 TUSC5Q8IXB3 177 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 BANPQ8N9N5 519 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 FBXO27Q8NI29 283 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 KIF18AQ8NI77 898 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 ADAMTS15Q8TE58 950 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 OR5P2Q8WZ92 322 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 CDS1Q92903 461 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 GTPBP3Q969Y2 492 aaKnown RBP20.64■□□□□ 0.89
C9orf47-202ENST00000375850 PPP3R2Q96LZ3 170 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 GATA5Q9BWX5 397 aaPredicted RBP20.64■□□□□ 0.89
C9orf47-202ENST00000375850 TUBB1Q9H4B7 451 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 EML4Q9HC35 981 aaKnown RBP20.64■□□□□ 0.89
C9orf47-202ENST00000375850 FIS1Q9Y3D6 152 aa20.64■□□□□ 0.89
C9orf47-202ENST00000375850 GTPBP1O00178 669 aaKnown RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 CLOCKO15516 846 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 LYPLA1O75608 230 aaPredicted RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 DANCRP0C864 163 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 KRT4P19013 534 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 ATP12AP54707 1039 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 RAC3P60763 192 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 DMTNQ08495 405 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 SELENBP1Q13228 472 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 LSM12Q3MHD2 195 aaKnown RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 TMEM176BQ3YBM2 270 aaPredicted RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 GALNTL6Q49A17 601 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 NUFIP2Q7Z417 695 aaKnown RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 DDIASQ8IXT1 998 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 RAB3IL1Q8TBN0 382 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 SMAP2Q8WU79 429 aaPredicted RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 PRPF18Q99633 342 aaKnown RBP20.63■□□□□ 0.89
C9orf47-202ENST00000375850 SRXN1Q9BYN0 137 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 BCO1Q9HAY6 547 aa20.63■□□□□ 0.89
C9orf47-202ENST00000375850 EIF4E2O60573 245 aaKnown RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 PRKCAP17252 672 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 SHC1P29353 583 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 SLC7A1P30825 629 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 CCT3P49368 545 aaKnown RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 PCLAFQ15004 111 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 ZNF672Q499Z4 452 aaPredicted RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 SLC25A53Q5H9E4 307 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 DCST2Q5T1A1 773 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 BHLHB9Q6PI77 547 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 Q6ZT83 130 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 CXXC5Q7LFL8 322 aaKnown RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 TOR1AIP2Q8NFQ8 470 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 LILRB1Q8NHL6 650 aaPredicted RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 PIWIL2Q8TC59 973 aaKnown RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 SFXN5Q8TD22 340 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 TWIST2Q8WVJ9 160 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 GRIP2Q9C0E4 1043 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 BARX1Q9HBU1 254 aaPredicted RBP20.62■□□□□ 0.89
C9orf47-202ENST00000375850 CARD8Q9Y2G2 431 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 DTNAQ9Y4J8 743 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 USF3Q68DE3 2245 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 ZANQ9Y493 2812 aa20.62■□□□□ 0.89
C9orf47-202ENST00000375850 A0A1W2PP18 115 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 ETV2O00321 342 aaPredicted RBP20.61■□□□□ 0.89
C9orf47-202ENST00000375850 EFNA2O43921 213 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 NPHS1O60500 1241 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 NTN1O95631 604 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 ADAP00813 363 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 TP53P04637 393 aaPredicted RBP20.61■□□□□ 0.89
C9orf47-202ENST00000375850 SPDYE7PQ495Y7 208 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 ALKBH2Q6NS38 261 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 CBLN3Q6UW01 205 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 OR5W2Q8NH69 310 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 GPR119Q8TDV5 335 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 OTUB1Q96FW1 271 aaPredicted RBP20.61■□□□□ 0.89
C9orf47-202ENST00000375850 COQ10BQ9H8M1 238 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 FAIMQ9NVQ4 179 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 TRAF6Q9Y4K3 522 aa20.61■□□□□ 0.89
C9orf47-202ENST00000375850 HEATR5AQ86XA9 2040 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 NPIPB9F8W1W9 429 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 TLX2O43763 284 aaPredicted RBP20.6■□□□□ 0.89
C9orf47-202ENST00000375850 OR3A2P47893 321 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 TP53BP2Q13625 1128 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 BHLHA15Q7RTS1 189 aaPredicted RBP20.6■□□□□ 0.89
C9orf47-202ENST00000375850 P2RY8Q86VZ1 359 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 UBLCP1Q8WVY7 318 aaPredicted RBP20.6■□□□□ 0.89
C9orf47-202ENST00000375850 KLHDC3Q9BQ90 382 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 RHOXF2Q9BQY4 288 aa20.6■□□□□ 0.89
C9orf47-202ENST00000375850 REG4Q9BYZ8 158 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms